Oryzias melastigma (Indian medaka): 112144324
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Entry
112144324 CDS
T07439
Symbol
retreg1
Name
(RefSeq) reticulophagy regulator 1 isoform X1
KO
K23880
reticulophagy regulator
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112144324 (retreg1)
Membrane trafficking [BR:
oml04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112144324 (retreg1)
ER-phagy
ER-phagy recepters
112144324 (retreg1)
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GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
Motif
Other DBs
NCBI-GeneID:
112144324
NCBI-ProteinID:
XP_024124584
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Position
LG17:15021832..15044024
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AA seq
456 aa
AA seq
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MLRIKEAGAGGCMEAAAGQPEPVNRSPSREEPRPGRSRWSVSGLVSWRQSPCRTSAAFTA
ANAAVWFVALCSFRTFSLLAILLALLVVTVTARDAVRCRFFGVHSQCSMTASWEIIDPGE
DSRSASGLQFSDSLKIFLQETSAFKQQNPGKFCLLVCSLCTFFAVLGRYIPGIVISYILV
LGVFLWPLVSSHDVSLWLEPVLQKLDFGIGEFFQKIKEDRVKRLIQAEAEKDGVESDLSS
MFPKLDSTVCKEMCVSDTEVSDVTWTDNGAFTLSEGHTPQTENSEDLDKEEAFTGGLAEF
PSLDNGTTTNGDDDDLSLGLGLPCAPPQQPAESKRALFSGMDQPADKTLELVNQMAEDVL
TAAVTAAIQERIEAAVCALAEDADPSRLPQPEQLLELMEESDSEVEDFELLDQSELEQLE
GELGLGEEKAKSTEEAQMESDKPPSSGFFSKLLRRH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatcaaggaagcaggcgccggcggctgtatggaggcggctgcggggcagccg
gaacctgtgaaccggtctcccagcagagaggagccgcgtcccggccgctcgaggtggagt
gtgtccggcctggtgagctggaggcagagtccgtgcaggacttcagccgcctttactgca
gccaacgcggcggtctggtttgtggccttatgctcttttcgaaccttcagccttctggcc
atcctgctggctctgctggtcgtcacggtaacggccagagatgctgttcggtgcagattc
ttcggggttcactctcagtgcagcatgacagcaagttgggagatcatcgacccgggggag
gacagtcggtctgcgagcggactgcagttcagcgactccctgaagatcttcctccaggaa
acgtcggccttcaagcagcaaaaccccggaaagttttgtttgctggtttgcagtctgtgc
accttctttgctgtcctaggacgctacattccagggattgtgatctcgtacattctagtg
ctgggtgtcttcctgtggcctctggtttcgtctcatgatgtcagtttgtggctggagcca
gttctgcagaagctggacttcggcatcggagagtttttccaaaaaatcaaggaggacaga
gtgaagagactcattcaggctgaggctgagaaagacggcgtagagtccgacctctcctcc
atgttccccaagctcgactctacggtttgtaaggaaatgtgcgtgtcggataccgaggtg
tcggacgtgacgtggacggacaacggtgcctttactttgtcagagggacacacgccgcag
acggagaactcagaggacctggacaaagaggaagccttcaccggcggcctcgcagagttc
ccctcactcgataacggcacgaccacaaacggagacgacgatgacctcagccttggcctt
ggccttccatgcgctccccctcaacagccagctgagtcaaagcgtgcactgttttctggc
atggaccaacccgcagacaaaaccctggagttggtcaaccagatggcagaagatgttctg
accgctgcagtcacagctgccatccaggagagaatagaagctgcagtctgtgccttagct
gaagacgccgatccatcgagactcccacagccagagcagctgctggagttgatggaggag
tccgacagcgaggtggaggactttgagctgttggaccagtcagagttagagcaactggaa
ggggagctggggctgggggaggagaaagcaaagtccacagaggaagcacagatggagtcc
gacaagccgccatcctctggattcttctccaaactcctcagacgccactga
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