KEGG   Oryzias melastigma (Indian medaka): 112144429
Entry
112144429         CDS       T07439                                 
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
  KO
K08573  calpain-3 [EC:3.4.22.54]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112144429 (capn3a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:oml01002]
    112144429 (capn3a)
Enzymes [BR:oml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.54  calpain-3
     112144429 (capn3a)
Peptidases and inhibitors [BR:oml01002]
 Cysteine peptidases
  Family C2: calpain family
   112144429 (capn3a)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_7 CAPN13-like_C_EFh EF-hand_8 EF-hand_5
Other DBs
NCBI-GeneID: 112144429
NCBI-ProteinID: XP_024124725
Ensembl: ENSOMEG00000000866
LinkDB
Position
LG22:complement(22812801..22830007)
AA seq 716 aa
MPYSPSGFFCDRLIRERERRDGEGSVTKPLRFNGQDFSTLRQECLQRKGLFEDDSFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLFRVVPQEQSFSESYAGIFHFQFWRYGDWVDVVVDDRVPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVDECRPSQLKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWAALSKAEKEKLQHQSAEDGEFWMSFDDFKKNYTKIEICNLTPDALESD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPDDNEVACTFVVSL
MQKNRRRERKMGANLFTIGFSIYEVPKEMHGNKQHMQKDFFLFNSSKARSKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASAGEES
EEDHHFRTIFQEIAGEDMEITANKLKNVLNRVITERKDLNTEGFSLESCRSMIALMDVSF
MDGTGRLNLQEFRHLWNKIKQWEGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYDI
ITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgccatactcaccgtcgggctttttctgcgaccggctgatccgggaacgggaacggagg
gacggtgaaggctccgtcaccaagcccctccgcttcaacggtcaggacttcagcaccttg
aggcaggagtgcctgcagaggaagggcctgttcgaggacgactccttccccgccaccgtc
gagtctctgggcttcaaggagcttggccacaagtccaacaaggtcaagaacatcgtctgg
aagaggccaaaggaaatctgtgacaacccccagttcatagtcgggggggccagcaggact
gacatctgccagggagatctgggtgactgctggctgctggccgccatcgcctgcctcacg
ctgaacgagaagctgctgttccgagtggttcctcaggagcagagcttttccgagagctac
gccggcatcttccacttccagttctggaggtatggcgactgggtcgatgtcgtcgtcgac
gaccgcgtcccgaccttcaacaaccagctggtcttcaccaagtcagcggagagaaatgaa
ttctggagtgccctgctggagaaggcctatgccaagcttcacggctcctatgaagccctg
aagggcggaaacaccactgaggccatggaggacttcaccgggggcgtcactgagttttat
gagatgaaggaagctcccaaagagctctacaagatcatgaagaaagctctggagagaggc
tccctgatggggtgctccatcgattctctggttcctgctcgctttgagacgcgcacggtg
acggggctggtgaaaggccacgcctactctgtgacggccgtggacgagtgtcggccgtct
cagctcaaggagtccaaggttcggctggtgcgcctcaggaacccgtggggtcaggtggag
tggaacggaccctggagtgacaactcgaaggagtgggccgccctctccaaggcggagaag
gagaaactgcagcaccagagcgccgaggacggggagttctggatgtcctttgatgacttc
aagaagaactacaccaagattgagatctgtaacctgactccagacgcgttggagtccgat
aagatccacaagtggacggtttctgtgaacgagggccgctgggtgcggggctgctccgcc
ggcggctgcaggaactacccagacactttctggaccaaccctcagtaccgcctgcgcctg
ctggaggaggacgacgacccggatgacaacgaggtggcctgcaccttcgtggtctcgctg
atgcagaagaacagacggagggaacgcaagatgggagccaacctcttcaccatcgggttc
tccatttatgaggtccccaaagagatgcacggcaacaaacaacacatgcagaaggacttc
ttcctcttcaactcctccaaggcgcgctccaaatcctatattaacctgcgcgaggtgacg
cagcgcttccggctgagccccggcgagtacgtcatcgtcccctccacctatgagccgcac
caggagggggagttcatcctgcgcgtcttctctgagaagaggaacacctccgaggaaata
gagaacaggatcgaagccgaccatccagtgccagcaccggcctcggcaggggaggagagc
gaggaggaccaccatttccggactatttttcaggaaatagctggtgaggacatggagatc
acagccaacaaactgaaaaacgttctgaacagagtgatcactgagcgtaaggacctgaac
acggagggcttcagcctggagagctgcaggagcatgatcgctctgatggacgtatccttc
atggacgggaccggcagactcaacctgcaggagtttagacatctgtggaataagatcaag
cagtgggagggaatcttcaaacattacaatgccgaccagtccggcagcatcaacagctac
gagatgaggaacgccgtgaacgatgcaggctttcgcctcaacaaccagctgtatgacatc
attacgatgcgctatgccaacgagaacatgaacatcgacttcgacagcttcatcagctgc
ctggttcgcctggaggccatgttcagagcattccaggccttcgatcaggatggagatgga
accatcagactcagcgtgctggagtggctccagctgaccatgtacgcctag

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