Oryzias melastigma (Indian medaka): 112144461
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Entry
112144461 CDS
T07439
Symbol
agfg1b
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1b isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112144461 (agfg1b)
04131 Membrane trafficking [BR:
oml04131
]
112144461 (agfg1b)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112144461 (agfg1b)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112144461 (agfg1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112144461
NCBI-ProteinID:
XP_024124782
Ensembl:
ENSOMEG00000015739
LinkDB
All DBs
Position
LG17:complement(17431475..17441181)
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AA seq
459 aa
AA seq
DB search
MATSAKRKQEETHLKMLREMTSLPANRKCFDCDQRGPTYVNMTVGSFVCTTCSGILRGLN
PPHRVKSISMTTFTQQEIEFLQKHSNEVCKQIWLGLYDDRTLVVPDFREPQKVKEFLQEK
YEKKRWYVPPDQAKTVASVHGPSMNSTGSPPEVHPLKSLQLNKTPLRQSPGLSRSQALAA
AQDKKFDLLSDLGGDIFAAPPTQTVGSTNFANFAQFPSQSAPQDQLNTNFANFEAFGNSA
IPSHLSPSPPLSSGGGVPVPSVCSAVPAQSRTGACTEDRYAALAELDNELSSSAVSGSSV
KGNIFGPVLGSSPAQNPPVLPSIPSGFAAVPSTNPFVATAMAPDMATNPFQPNGRAPPAA
PFGTGSMSMPTGFGNASSYCLPTSFSGNFQQQFPGQAPLPYAQPGAYHPQANGPAFPVYG
QNKPSITPFGQPMAVPGMSNNPFMAGSFPSGGSSTNPFL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagcgcgaagcgtaagcaggaggagactcacctaaagatgctccgagaaatg
acgagcctgcctgcgaacagaaaatgcttcgactgcgaccagcgcggcccgacctatgtc
aacatgacggtgggctcgttcgtctgcaccacctgctccgggatcctgcgagggctgaac
cccccacacagagtcaagtccatctccatgaccacgttcacgcagcaggaaatcgagttt
ctacagaaacacagcaacgaggtctgtaaacaaatctggctgggcctttatgacgacagg
acattagttgttccagatttccgagaaccacagaaagtaaaggaatttcttcaagaaaaa
tatgaaaagaagagatggtacgttcctccagaccaggccaagactgttgcaagtgttcat
ggtccctccatgaacagcactggcagcccccccgaagtgcaccccctgaaaagcctgcag
ctcaacaagacacctctgcgtcagtctccaggtctgagccgctcccaggccctcgctgct
gctcaggacaagaagttcgatctgctctcagacctggggggggacatttttgctgctccc
ccaacccagacggtcggctccaccaactttgccaactttgcacagtttccgagccagtca
gcacctcaggatcagttaaataccaactttgccaattttgaagcttttgggaactctgca
attccatcccatctgagcccctcaccccccctctcatcaggtggaggggttcctgttccg
tccgtgtgcagcgccgttcccgctcagtccaggacgggggcgtgcacggaggaccgctac
gctgcgctggccgagttggacaacgagctcagctcctctgcagtgagcggcagcagcgtg
aaggggaacatatttggacccgtgcttggttcgtctccagctcagaacccgcctgtgtta
cccagcattccgtctggttttgcagcagtgccgtccacaaacccgtttgttgccacggcg
atggctccagacatggcgactaaccctttccaacccaacggtagggctccccctgcagct
cccttcggtaccggctctatgagcatgcccactggctttgggaatgcgtcttcatactgc
ctcccgaccagcttcagcggaaacttccagcagcagttccctggccaggcccccctccct
tacgctcagcccggggcctaccaccctcaggctaacggccccgccttccctgtctacgga
cagaacaagccctccatcacgcccttcgggcagccaatggctgtccctgggatgtccaat
aacccgttcatggcgggttccttcccttcaggaggctcctccaccaaccccttcctgtaa
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