Oryzias melastigma (Indian medaka): 112144486
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Entry
112144486 CDS
T07439
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oml03029
]
112144486 (trub2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112144486 (trub2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
112144486
NCBI-ProteinID:
XP_024124798
Ensembl:
ENSOMEG00000006702
UniProt:
A0A3B3BJN4
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Position
LG5:complement(34442971..34451656)
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AA seq
329 aa
AA seq
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MVTPAALTFRRLHGLFCVYKPLGVHWKLVRDTIEANLLKGVNAAPPLALPHKVRFLAEPT
SRTGEHTALTLTATSVPALSKHPLVTGPEFQHIRVGVGHRLDVSSSGVLVLAVGNGNKIL
DDLYKTRVTRDYTLECEFGTATDDFTRTGQVVERSTYDHITLDKLDRVLAMLEGANQKAL
RVFSNVDMSSQEAYELAVRGLLGPEGKSSPILTGLRCIHFQPPNFTLEVQCLNETQKYLR
KVVHEIGLELRSTAVCRGVRRTRDGLFTSRDALTRNHWSAADIMQAIKQHRRTKKAENHT
QIQAKTPVIQTSEEGLTATSQDKVEEMSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccggcggcgctgacatttcgtcggttacatggcttgttctgtgtttacaaa
cctctcggtgtgcactggaagctcgtgcgtgataccatcgaggctaatctccttaaagga
gtgaacgccgctcctccgctggctctccctcacaaggttcggttcttggcggagccgacc
agccgaaccggagaacacacagcgctcaccctgacagcaacatctgtgcccgcgctctcc
aaacatcctctggtaactggacctgaattccagcacatacgcgttggcgtgggacatcgc
ctggatgtttcctcctctggcgttctggttctcgctgttgggaatggaaacaagattcta
gatgatctgtacaagacgagagtgacccgggattatacgctggaatgtgaatttgggacg
gcgactgatgacttcactcgcacgggtcaagttgtggaaagatccacttatgatcacatc
actctggataagctggacagagttctggcaatgctggaaggagccaatcagaaggctctg
agagtgttctccaacgttgacatgagctctcaggaagcctacgagttggctgtgcgaggc
ttactaggacctgaggggaaatcatctcctattttgacaggactgcgatgcattcacttc
cagccgccaaacttcactttagaggtgcagtgcctgaacgaaactcagaaatacttgcgg
aaagtggtgcacgagatcggactcgaactgcgcagcactgcagtgtgcagaggtgtgagg
cgcaccagagacggactcttcacctctcgcgacgcgctcacccgaaaccattggagcgct
gctgacattatgcaagccatcaaacagcaccgccgcaccaagaaggctgaaaatcacacc
cagattcaggcgaagacgcctgtgatccaaacatctgaagaaggcctcacagccactagt
caagacaaagtagaggagatgtcatcatag
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