Oryzias melastigma (Indian medaka): 112144486
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Entry
112144486 CDS
T07439
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oml03029
]
112144486 (trub2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112144486 (trub2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
112144486
NCBI-ProteinID:
XP_024124798
Ensembl:
ENSOMEG00000006702
UniProt:
A0A3B3BJN4
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Position
LG5:complement(34442971..34451656)
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AA seq
329 aa
AA seq
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MVTPAALTFRRLHGLFCVYKPLGVHWKLVRDTIEANLLKGVNAAPPLALPHKVRFLAEPT
SRTGEHTALTLTATSVPALSKHPLVTGPEFQHIRVGVGHRLDVSSSGVLVLAVGNGNKIL
DDLYKTRVTRDYTLECEFGTATDDFTRTGQVVERSTYDHITLDKLDRVLAMLEGANQKAL
RVFSNVDMSSQEAYELAVRGLLGPEGKSSPILTGLRCIHFQPPNFTLEVQCLNETQKYLR
KVVHEIGLELRSTAVCRGVRRTRDGLFTSRDALTRNHWSAADIMQAIKQHRRTKKAENHT
QIQAKTPVIQTSEEGLTATSQDKVEEMSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccggcggcgctgacatttcgtcggttacatggcttgttctgtgtttacaaa
cctctcggtgtgcactggaagctcgtgcgtgataccatcgaggctaatctccttaaagga
gtgaacgccgctcctccgctggctctccctcacaaggttcggttcttggcggagccgacc
agccgaaccggagaacacacagcgctcaccctgacagcaacatctgtgcccgcgctctcc
aaacatcctctggtaactggacctgaattccagcacatacgcgttggcgtgggacatcgc
ctggatgtttcctcctctggcgttctggttctcgctgttgggaatggaaacaagattcta
gatgatctgtacaagacgagagtgacccgggattatacgctggaatgtgaatttgggacg
gcgactgatgacttcactcgcacgggtcaagttgtggaaagatccacttatgatcacatc
actctggataagctggacagagttctggcaatgctggaaggagccaatcagaaggctctg
agagtgttctccaacgttgacatgagctctcaggaagcctacgagttggctgtgcgaggc
ttactaggacctgaggggaaatcatctcctattttgacaggactgcgatgcattcacttc
cagccgccaaacttcactttagaggtgcagtgcctgaacgaaactcagaaatacttgcgg
aaagtggtgcacgagatcggactcgaactgcgcagcactgcagtgtgcagaggtgtgagg
cgcaccagagacggactcttcacctctcgcgacgcgctcacccgaaaccattggagcgct
gctgacattatgcaagccatcaaacagcaccgccgcaccaagaaggctgaaaatcacacc
cagattcaggcgaagacgcctgtgatccaaacatctgaagaaggcctcacagccactagt
caagacaaagtagaggagatgtcatcatag
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