KEGG   Oryzias melastigma (Indian medaka): 112144489
Entry
112144489         CDS       T07439                                 
Name
(RefSeq) F-box/LRR-repeat protein 16
  KO
K10282  F-box and leucine-rich repeat protein 16
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112144489
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     112144489
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_8 F-box-like F-box
Other DBs
NCBI-GeneID: 112144489
NCBI-ProteinID: XP_024124801
LinkDB
Position
LG5:6779760..6792219
AA seq 509 aa
MLNMSSSSELKSPCMTRNGIVKLAPNQPNGLGSASITKGTPAAKNRLCQSSSVPSILPPS
SSSLSYHHHHHHHHLLLDATGMPHTTSPLLTSDLEPGKPLIGLKPSLRHLPPLTLPKPVL
FERQLVLDEKLLSRLFCYFTTAEKCMLAQVCKTWCKVLYQPKFWEGVTPILHAKELYNIL
PNGEKEFVSLQAFALRGFQAFCLVGVSDLDICEFIDNYPLSKKGVRSVSLKRSTITDAGL
EVMLEQMQGLMHLELSGCNDFTEAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPNL
SELSLQAYHVTDTAMAYFTAKQGYTTHTLRLQSCWEITNHGVVNMVHSLPNLTALSLSGC
SKITDDGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDTGL
GYLSTMSSLKSLYLRWCCQVQDFGLQHLFGMRSLRLLSLAGCPLLTTTGLSGLIQLHDLE
ELELTNCPGATAELFKYYSQHLPHCMVIE
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgttgaacatgtcctcctcctctgagctgaagtctccctgcatgactcgcaacggaatt
gtgaagttggcccctaaccagcccaacggcctgggcagcgcgagcatcaccaaggggact
ccggctgccaagaaccgcctttgccagtcatcttcagttccctccatcctccccccttct
tcatcttctctctcttaccaccaccaccaccaccaccatcacctcctcctggatgccact
ggcatgccccacactacttctccactattgacctctgacctggagcctgggaagcctctg
attggcctgaagccatcactccgccatctccctcctctcacccttcccaagcctgtattg
tttgagcgacagcttgtcctggatgagaagcttctcagccggctcttctgctatttcacc
acagctgaaaaatgtatgctggcacaggtgtgcaagacatggtgcaaagttctgtaccaa
cccaagttctgggaaggagtgacacccatcttgcatgccaaggagctgtacaatattctg
cccaatggggagaaagagtttgtaagcctgcaggcctttgcactgcgcggcttccaggca
ttctgcctggtgggagtgtcagacctcgacatttgtgaattcatagacaactaccctctg
tccaaaaagggtgttcgctcagtcagccttaaacgctcgaccatcacagatgctggtttg
gaggtcatgttggagcagatgcaaggcctgatgcatctggagctctctggctgcaatgac
ttcacagaggccggcctatggtccagcctcaatgccagactcacttctctgagcgtcagt
gactgtatcaacgtggcagacgacgctatcgctgccatctcccagctcctgcccaacctc
tccgagctgagccttcaggcctaccacgtcactgacactgccatggcctactttacagcc
aagcagggctacaccacccacactctgcgacttcagtcatgttgggagatcaccaatcat
ggagtggtgaacatggttcacagcctccccaacctcaccgccctcagtttgtctggctgc
tccaagatcacagatgatggtgtggagctggtggctgagaacctgcggaagctgcgcagc
ctggatctgtcctggtgccctcggatcactgacatggccctggagtatatcgcctgcgat
ttgcacaaactggaagaactggtgctggacagatgtgtgcggatcacggacaccgggctg
ggctacctgtccactatgtcatctctgaagagcctttatctccgctggtgctgtcaggtt
caggattttggactgcagcatttgtttggaatgagaagtcttcgcttactgtcgcttgca
ggctgcccccttctgaccaccactggcctgtccggtctcatccagctgcacgacctggag
gagctggagctcactaactgtcctggagcaacagcagagctcttcaaatattactcccag
cacctgccccactgcatggtcattgaataa

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