Oryzias melastigma (Indian medaka): 112144492
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Entry
112144492 CDS
T07439
Name
(RefSeq) prolargin
KO
K08125
prolargin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112144492
Proteoglycans [BR:
oml00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
112144492
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
112144492
NCBI-ProteinID:
XP_024124806
Ensembl:
ENSOMEG00000020149
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All DBs
Position
LG5:complement(11589006..11601637)
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AA seq
379 aa
AA seq
DB search
MKAGVGLLSALALFLLIGPAFCQKPRTKKPTRRPATTKKPFVPKPAKLPQPEPKEPTDYP
PVILGPPSFFPDCPRECLCSPSYPSSLNCENRNIRVIPVIPERTHYLYLQNNYISEVTSE
AFRNATEVSWINLANNRIVRIDKQVFEKIPGLLYLYAQKNLLKEVPSGLPSTLEQLSLSK
NRISKIPAGAFKNLNHLSLLDLYDNQLSDSDLGKNTFKDLKNLVQLNLAHNALKKMPAGV
PAGLVQLFLDKNRIDDIPKDYFDGFTHLAFVRLNHNQLSDKGIPKSVFNLSSLMDLQLSH
NQLSMVPLFNSHLQHLHLNHNSIESINGTEICPFNLHSDPSNPDVLPRLRYLRLDGNHLS
PPIPIDIFMCFRHLHSIVI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctggtgtgggactcctctctgctctagccctgttcctcctgataggaccagct
ttctgtcagaaacctcggacaaagaaacccaccaggcgtccagcaaccaccaagaagcca
tttgtccccaagcctgctaaactaccccagccagagcccaaggagcccacagactacccc
ccagtcattcttggtccgccgtcctttttcccagactgccccagagagtgtttgtgctct
ccaagctacccgagttctctcaactgtgagaaccggaacatccgtgtgatcccagtcatc
ccagagagaactcattacctgtacttgcagaacaattacatttcagaggttacttccgag
gcgttccgcaatgctactgaagtcagctggatcaatctggccaacaaccgcatcgtccgc
atagacaagcaggtttttgagaagatcccaggtctgctgtacctgtacgcacagaaaaac
ctgctgaaagaagtcccatcaggtcttccatcgactctggaacagctcagtctgagcaag
aatcgcatctccaagattcctgccggggccttcaaaaacttgaatcatctgtctctgctt
gacctgtacgacaaccagctgagtgacagcgacctgggaaaaaacacctttaaggacctg
aagaatctggtgcagctaaacttggctcataatgctctcaagaagatgcctgctggcgta
ccagccggcctcgtacagctcttcctggataaaaaccgcatagatgacatcccaaaagac
tactttgacggcttcactcacctggcgttcgtgaggctgaaccacaaccagctgagcgac
aaaggcatccccaagtccgtgttcaacctgtcctctctgatggacctgcagctgtcccac
aaccagctcagcatggttcctctcttcaacagccacctgcagcacctgcatctcaaccac
aacagcattgagagcatcaacggcactgagatctgcccattcaacctgcattctgacccg
agtaaccccgatgttctgccgaggctgaggtacctacgcttggatggaaaccacttgagt
cctcccatcccgatagatatcttcatgtgcttcagacatcttcattccattgtcatttag
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