KEGG   Oryzias melastigma (Indian medaka): 112144546
Entry
112144546         CDS       T07439                                 
Symbol
ppp4r1l
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
  KO
K15424  serine/threonine-protein phosphatase 4 regulatory subunit 1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112144546 (ppp4r1l)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oml03400]
    112144546 (ppp4r1l)
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     112144546 (ppp4r1l)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     112144546 (ppp4r1l)
SSDB
Motif
Pfam: HEAT PPP2R1A-like_HEAT HEAT_2 WRNPLPNID TOR1L1_N
Other DBs
NCBI-GeneID: 112144546
NCBI-ProteinID: XP_024124887
Ensembl: ENSOMEG00000013394
LinkDB
Position
LG5:complement(20335981..20351249)
AA seq 964 aa
MAGLSLYFEDSHDDMDDFGFDDYGSDCDGIRITAFLDAGQDNLTPLGRLEKYAFSENVFN
RQIVARGLLDVLREFSENENDFISVMETVARMSEDGEPTVRAELMEQVPNIAMFLHESRP
NFPAAFSRYLVPIVVRYLTDPNNQVRKTSQAALLVLLEQGLISKADMETKVCPVLLDLTE
PSSDDDYKIEAVAILCKVVTMLSKDTVEHLLLPRFCDLCSDGRLFQVRKVCAANFGEFCS
IVGQEATEKLLMPKFFELCSDSLWGIRKACAECFMMVSNSTSPEVRRSKLSPLFINLISD
QSRWVRQAAFQSLGRFISTFANPSSTGLHFREDGTLPEIPSNCSLNSLNCNEISNCHTER
SIPHTPPNQDGRATPSPEHVSTAESEDLHNYEDDHTSVLGETCDNFPLTGRSDSSTATNS
PGITKETEQTDENFNSFHYWRPPLPDISGELEMLNCSTSVEATEKEEELEENCPDSKSSH
GKATSDQIQKVLDCLQPHIADPDVQVQVQVLSAALKAAQLDSPTDNSPADLQLEVQPESD
SGNLSPECKSEELQSEIEGTLTEEEQTMESVPASETCPVQEQGDEETQTEPLENKEESPP
CSPVMECELIESVEEEEKEDSPHSPLSEDKPKIQNVIPQPLLDQYLSMTDPARAQTVDTE
IAKHCAFSLPGVALTLGRQNWHCLKDTYETLASDVQWKVRRTLAFSIHELAVILGDQLTA
ADLVPIFNGFLKDLDEVRIGVLKHLYDFLKLLHADKRREYLYQLQEFMVTDNSRNWRFRY
ELAEQLILIIELYNHRDVYDYLRHIALTLCSDKVSEVRWISYKLVVEILQKLYASRADDL
GLEFIKELTGRFCHCPKWVGRQAFAFICQAVVEEDCMPMDQFSQHLLPSLLSLSSDPVAN
VRVLVAKALRQSVMEKAYFREPGCAYSNKLEETVIALQSDKDRDVRFFASMDPSKGLMDT
APFI
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcaggtctatctttatactttgaagatagtcacgatgatatggacgactttggattc
gatgactacgggtcagattgtgacggcattcgcatcacagcttttcttgatgcaggacag
gacaacctcacacctcttgggaggctagagaaatatgctttcagcgaaaatgtctttaac
aggcaaatcgtggctcgcggcctactcgatgtgcttcgagagttcagtgagaatgaaaat
gactttatcagtgtcatggagactgttgccagaatgtcagaagatggagagcctacagtg
cgagctgagctaatggagcaagttcctaatatcgccatgtttttgcacgagagtcggcca
aacttcccagccgctttttcaagatatttggtacctattgtggtccgatatctaactgat
ccaaataaccaggtgcgtaaaacgagtcaggcagccctgctggttctgttggagcagggc
ctcatctccaaagccgacatggagaccaaagtttgtccggttcttctcgacctgacagaa
cccagcagtgatgatgactacaaaatcgaggcagttgctatcttgtgtaaagttgtgact
atgttgagcaaagatacagtggagcatctgttgctgccccgtttttgtgacctgtgcagt
gacggcagactctttcaagtgcggaaggtgtgtgcggccaattttggggagttttgttct
attgttggacaggaagccacagaaaaactactgatgcccaagttcttcgaactatgttca
gacagcctttggggcataaggaaagcttgcgccgagtgcttcatgatggtttccaattcc
acttctccagaggtccggcgatcaaagttgtcccctttgttcatcaaccttattagtgac
cagtctcgctgggtccgacaggctgcctttcagtctctggggcgattcatctccaccttt
gcaaacccctccagcacaggccttcacttcagagaggacggcacccttccagagattccc
agcaactgctcactcaactccctaaattgcaatgaaataagcaactgccatacagaaaga
agcatcccccacacgcctcccaaccaggatggccgcgctacaccatcaccagagcatgtt
tcgacagcagaaagtgaagacttgcacaactatgaggacgaccacacttctgttctcgga
gagacgtgtgacaacttccccctcacggggagaagtgacagctccaccgctacaaacagt
cccggcatcacaaaagaaacggagcagacagacgagaactttaactcttttcattattgg
aggcctcccctgcccgacatcagcggggaactggagatgttaaactgttcgacatcagtt
gaagcaacagaaaaagaggaagaactagaggagaattgtcctgattccaagtctagccac
gggaaagccaccagtgatcagatccagaaggttttggattgtttgcaacctcacattgca
gatcctgacgtacaagttcaagtccaagtgttgtcagcagctctgaaggcagcccagctc
gacagcccgacggacaacagccctgctgacctgcagctagaagtgcagcctgagagcgac
tctggaaacctttcaccggagtgtaaatctgaggaacttcagtcagagatcgaagggacg
ctgacagaagaagagcaaaccatggaatctgttccagcctcggagacgtgtcctgtccag
gaacaaggcgacgaggagacacagacagagccgctggaaaataaggaggagtctcctcca
tgctctcctgttatggagtgtgaactaatcgagagtgtagaggaggaggagaaggaagac
tctcctcacagcccgttgtctgaggataagcctaaaatccagaatgtcatcccccagcct
ctgttggaccagtacctgtcgatgacggatccggcacgagcccaaacagtggatacagag
atcgccaaacactgtgccttcagcctcccgggagtggcgctcacgctcggtcgacagaac
tggcactgtctcaaggacacatacgagaccctcgctagtgatgtacagtggaaagtgcga
cgcacgctggctttctccattcatgaactggcggttatcctgggggaccagctgacggca
gcggatctggtgcccatcttcaacggctttctgaaagacctggatgaagtccgcatcggc
gtgctcaagcatctttatgacttcttaaagctgctgcatgcagacaaaaggagagagtat
ctgtaccaactgcaggagttcatggtcacagacaacagtcgcaactggagattcagatat
gagctggcagagcagctgatcttgattattgagttgtacaaccaccgtgacgtgtacgac
tacctcagacatatagcgctcaccctctgctccgacaaagtgtcagaagtccggtggatc
tcttacaaactggtggtggaaattctgcagaagctgtacgccagcagggctgatgatctg
ggcttggagttcatcaaggagctgaccgggaggttctgccactgtcccaagtgggtggga
agacaggcctttgccttcatctgccaggctgttgtggaggaggactgcatgcccatggat
cagttcagccagcatctcctgcccagtctgctcagcctgtcctcagaccctgtagctaac
gtccgcgtcctggtggccaaggctttacgtcagagcgtgatggagaaagcttattttcga
gagccaggctgtgcctattccaacaaactggaggagacggtgatcgctctgcagtccgac
aaggaccgagacgtccgattctttgccagcatggacccaagcaaaggcctaatggacacg
gctccgtttatctag

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