Oryzias melastigma (Indian medaka): 112144565
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Entry
112144565 CDS
T07439
Name
(RefSeq) zinc finger E-box-binding homeobox 2
KO
K23560
zinc finger homeobox protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112144565
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112144565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
zf-C2H2_6
zf-piccolo
NOD
Csm1_B
Zf-C2H2_ZNF451_2nd
Motif
Other DBs
NCBI-GeneID:
112144565
NCBI-ProteinID:
XP_024124911
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All DBs
Position
LG5:26176691..26210716
Genome browser
AA seq
1007 aa
AA seq
DB search
MTEESRGKRRKQANPRRNRDAEQVSSLGSEEEDKVWSLGPPDCQEDPDKTSLTPSEGTEE
AGSPRPHSLSPGGRNGCAQAESEAKSREDAAFISADGGQESLRMYCKSSDSQNSLEDLSH
YDFWAHLRKASTSASIWDHLSQNGVADVYRSSRHDDLPPAIWSPGAQQCSPEGSDAVQLQ
QRCPFCHRTFLRGASLRDHVKFCQDREGGPMVCPLCGYTSTFSSHMERHLLLHNQLQDKA
GITSDQGMDNRKFKCLQCGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHL
SSKKCLSGGGHAGLNASGLLNGHSQNSYPHSLSTSPSAGKSREDSQNQESTRAVGQAPTS
PQQMLLPDLKPNTASLISASSVSRSWSPSPELPPRAGFLKGNTLLPFFHSGARFEQMLQG
MLHREADKEMEKDKLEDSNVVYNGGGHEKKVSPDRNKEAVRSSDGESSVFGVTCRWCLQL
FPNMAVLLQHERYLCKNNREAIEVSDGPQRKDQSSPPMFFPRSSFQSEKNKPSELLNGFS
GKKSPLEKPSWHTVPQQLLVAPAPSSNALSSHMYWSSQDKGSPRRLIHRSLEEPSPRSRR
RVPSGLSSPVCLDLTGCSPQISPPHGSAWSAQNEPLDLSLPKQLSERRWSSKTLNGVSVR
GEKLGRLAPAPHLTLTQGSVFSGAAAFPGSLYNGFPIFSQPGVGLSVHDGATSPFSQTAN
CTGFRSPLAYMLKVDAEAAWKKILHEGHGLMSETLNRGDFDYLSLIDDGLEGEGGPGRKR
LKKTDEGLYACDICDKTFQKSSSLLRHKYEHTGKRPHECKICNKAFKHKHHLIEHSRLHS
GEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCSKDQDLDQDQEEMLLTPGAGGLARETSLS
TDDTPTGHSFLSDSSLDGALKDAEEEEEVGGSEALVSLSEAASDLGGSPTQGSPAVESRA
QMEKNDLDVRNQEDQTGSDTWDKGTENQHGDMDELSSNTQDFLHTNI
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaaagccgaggcaagcgcaggaagcaagccaacccaaggaggaatcgagat
gcagaacaagtgagttcacttgggtctgaagaggaggataaggtgtggagcctggggcca
ccggactgccaggaggacccggataagacgagcctgactcccagcgaggggacggaggag
gctggcagcccgcggccgcacagcctcagccctggcggcagaaacggctgtgcccaggcg
gagtcagaggccaaatccagggaggacgccgccttcatatccgctgacggaggccaggaa
tcgctgaggatgtactgtaagagctcagactcacagaactccttggaggatttatctcac
tatgacttctgggcccatttgaggaaagcctcgacctcagccagtatctgggaccacctg
agccaaaacggcgtggcggatgtttaccgctccagcagacacgatgacctcccacctgcc
atctggtctccaggagctcagcagtgctcacctgagggatcagatgcagtccaactgcag
cagcgctgtccgttctgtcaccgaaccttcctgcgaggagcttctctgagggaccatgtc
aaattctgccaggatcgggaggggggtcccatggtgtgcccgctctgtgggtacacgtcc
accttcagttcccacatggagcgccacttattgctccacaaccaactacaggacaaggcc
ggcatcacttccgatcaaggaatggacaacaggaagttcaaatgtttacagtgtgggaaa
gcgtttaaatacaaacaccacctcaaagaacatctccgaatccacagtggggagaaaccg
tacgagtgttccaactgcaagaagcgtttctcccattcgggctcctacagctcccatttg
agcagcaaaaagtgccttagtggtggagggcacgctgggttaaatgccagcggattgctc
aacggacatagccaaaattcctacccgcattccctttccacgtctccctctgctggaaaa
tccagagaggactcacaaaaccaggagagcacgagagccgtgggtcaagcgcccacaagt
cctcagcagatgttactgccggacctcaaaccaaacaccgcaagcctcatcagcgcctcg
agcgtgtccaggtcgtggagtccttcgccagaacttcccccgagagccggttttctaaaa
gggaatactctgctgcctttcttccactccggagccagatttgagcagatgctgcagggg
atgcttcacagggaagcagataaagagatggagaaagacaaattagaggacagcaatgtg
gtctacaacggtggagggcacgagaaaaaggtttcaccagacagaaataaagaagcagtg
aggtctagtgatggggagagcagtgtgtttggggtgacatgtcgctggtgcctgcagctt
tttcccaacatggctgtgcttctgcagcacgagcgctacctctgtaagaacaacagggaa
gcgatcgaagtgtctgatggccctcaaaggaaggatcagtcgtcgccgccaatgttcttc
cccagatcttctttccagtcagagaaaaacaaaccgagtgaacttcttaatggattcagt
gggaaaaagtctcctcttgagaagcccagctggcacaccgtcccacaacagctcttggtt
gcgcctgcaccgagcagcaacgcactgtcctcacacatgtactggtccagtcaagacaaa
ggaagcccgcgacggctcatacaccgctctctggaggaaccgtctcctcggagcagaaga
cgggttccatcaggactgagctctccggtctgcctggacctcaccggttgctcacctcaa
atctcaccgccccacggcagtgcctggtctgcacagaacgaaccgctggacctgtctcta
cccaagcagctgtccgagagaaggtggagcagcaaaaccctgaacggtgtgtcagtcaga
ggggagaagttaggccgactggctccagctccacatctgaccttaactcagggctcagtc
tttagtggggccgctgcctttccaggctccttatacaacggatttccaattttcagtcag
cccggtgtgggactgtcagtgcacgatggagcaacatctccgtttagccagacagctaac
tgcactggatttcgatctcctttagcttacatgttaaaagtggacgcagaggcagcatgg
aagaagatcctccatgaaggacacggtctaatgagtgaaacattgaaccgaggggatttt
gactatctgtctttaatcgatgacgggttggaaggagaaggaggaccaggaaggaagagg
ctgaagaaaacggatgagggactttatgcttgtgacatctgcgataaaaccttccagaag
agcagctctctgctccgacacaagtatgagcacacaggcaagcgacctcatgagtgcaag
atctgcaacaaggccttcaaacataaacaccacctgattgaacacagccggctgcactcc
ggagagaagccctaccaatgtgacaagtgcggcaagcgcttctctcattccggttcctac
tcccagcacatgaaccaccgctacgcctactgcagcaaagaccaggatctggaccaggac
caggaggagatgctgctcactccaggagcgggcggcctcgctcgggaaacctcgctgtcc
acggacgacactcccacgggccactcttttctctccgactccagtctggatggcgctctc
aaagacgcggaggaagaggaggaggtcggaggaagcgaggcacttgtgagtttgtcagaa
gctgccagcgacctgggaggtagtcccacccaggggtcgccagcagtggagagcagagcg
cagatggagaaaaacgatttggatgtgaggaatcaggaagatcagacaggaagtgacacg
tgggacaaaggcactgagaaccaacatggagacatggacgaactgagctcaaacacacaa
gacttcctccatacaaacatttaa
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