Oryzias melastigma (Indian medaka): 112144581
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Entry
112144581 CDS
T07439
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112144581 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112144581 (usp48)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112144581 (usp48)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112144581 (usp48)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112144581 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF1419
DUF6276
Motif
Other DBs
NCBI-GeneID:
112144581
NCBI-ProteinID:
XP_024124926
Ensembl:
ENSOMEG00000001449
LinkDB
All DBs
Position
LG5:14380268..14393598
Genome browser
AA seq
1053 aa
AA seq
DB search
MAPRVQLEKAAWRWVENVKPEEITQEHIELAYRINLPACKRGACRRNCKGNPNCLVGIGE
QAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRILYQC
HNSRAQEHDTETDYDPQSISEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQQQFCGQFFYVTECDQCGRSSALPSRFYELELNIQG
HKNLTECITEFLKEEKLDGENRYFCESCQSKQNATRRIKLNSLPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMEPFLEARPGQKSVYELSAVLIHRGISAYSGHYIAHVKDALTG
DWYKFNDEEIEKMEGKKLQLGIEEDIAEAVKSQSRKPKCSKGYHCSRNAYMLVYKVQAEE
HLEPSETSVEVPAFLQRLVDRDNHRFEEWCMEMSDMRKQSVDKGKAKHEEVKELYELLPA
RDGEQYEFIPLDWLKKWLDDSTATKEIDTSLFLCTHGKLHPDKVGDCKRVSLQAADLLYR
RYGGGPRLDGSSLCRDCVSWRCRVLRLKNQLNEDFKEVSNLVKRSLSGEGYWVGKASLRS
WRQLALEQLEEDEHEGKLSDGQTNGQGPHTNNIKEFSSELSGNTEEEMKTFNEDILCSHG
GLCILEAERKLVSPEVWSKLREYFPKAPEFTEKQEPCRQCLTLEQEEKDNEAVSKMMALD
QKNQLLNLFHEKNRPMLSKWPQNTDVLYVVPLFFVEEWRKFIRRPTKSSPVSNVGNSLLL
CPHGGFMFTYDSLISGEAQHIALLWPSEWEVISRLFIVDQAISIHCLRESTEGSTPQYTT
QPELCWDCRESFLFQQQKDLREYNQATIYIRKVLEDARMVKDMTPEMNASSSEAEEEREE
HMKVEGGEDPDFGQSSLLQSQDGAKRLRLADGTAAPAPPPVTTSAKVGGIRRSTRHRKLR
GEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSLGVVPESIICL
KADEPIADYAAMDDAYQVRLPEEGFKGTGLLGH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgtgtacagttggaaaaggcagcttggcgctgggtggaaaacgtgaaacca
gaagaaatcacgcaggagcacatcgagttagcatatcgcattaacctcccggcctgcaag
agaggagcctgcagaagaaattgcaaagggaatcccaactgtcttgtggggattggcgaa
caagcctggctcggggagatcgatgagaacacgttccacaacatcgacgacccaaattca
gaacgcagagataagaacacatttgttggactgaccaacctcggtgcaacatgttacgtc
aacacattcctgcaggtgtggttccataacctggagcttcggaggattctctatcaatgc
cacaattcacgagcacaggagcatgacactgaaacagattacgaccctcagtccatctct
gagcatctgcagtatctgtttgcactcctgcagaacagcaacagaaaatacatcgatccg
tcagggctggtcaaagctctgggtctggataccggacagcagcaggatgctcaggagttt
tcaaagcttttcttgtctctgttggaggacacgttgtccaagcagaagaaccctaacctt
cagaatgtgatccagcagcagttctgcggccagttcttctatgtgactgagtgtgatcag
tgtggacggtcgtcagcgctgccgtctcgtttctatgagctggagctcaacatccaggga
cacaagaacctgacggagtgtattacagagttcctcaaggaggagaagctggatggggag
aaccgttacttctgcgagagctgtcagagtaaacagaacgctacccgcaggatcaagctg
aacagccttcctccgaccctgaacctgcagctcatgcgcttcgtctttgacagacaaacc
ggtcataagaagaagctcaacaccttcatcagttttcctgagcagctggatatggagcct
ttcctggaggcaagaccaggacagaagagtgtgtatgaactgagcgcagtgctgatccat
cggggcatcagtgcgtactcgggacactacatcgcccatgtgaaggacgctctgaccggt
gactggtacaaattcaatgatgaggaaattgaaaagatggaggggaagaagctgcagctt
ggtattgaggaagacattgctgaggcggtgaaatctcagtcacggaagccaaagtgcagc
aaaggctaccactgctccagaaacgcctacatgctggtgtataaggtccaggcggaggag
cacctggagccctccgagaccagtgttgaggtgccagccttccttcagaggctggtggac
cgagacaaccacaggtttgaggaatggtgcatggagatgtccgacatgcggaagcagagc
gtggacaaaggcaaggcgaagcacgaagaggtgaaagagctgtacgagcttttgcccgca
agagatggtgaacagtacgagttcattcctctggactggctgaagaagtggctggatgac
tccaccgccacaaaggagatcgacacctccctcttcctgtgtactcacggaaaactgcac
ccagacaaggtgggggactgcaagagggtgtccctgcaggccgcagatctgctctacagg
cgatatggcggggggcccaggctggatggctcgtctctgtgcagagactgtgtcagctgg
agatgccgagtcctgcggctcaaaaaccagctcaatgaagactttaaggaggtgtccaac
ctagtgaaacgctcgctcagtggggagggctactgggtgggcaaagcttccctgagaagc
tggaggcagctggctttggagcagctggaagaagacgagcacgaaggcaaactcagcgat
ggccagaccaacgggcagggaccacacactaacaacatcaaagagttcagttcagagctg
tcgggaaacactgaggaggagatgaagacctttaatgaggacatcctctgcagtcacgga
ggcctttgcattctggaggctgagcggaagctggtctctcctgaagtgtggtccaagctt
cgagagtacttccccaaagcgccagagttcacggagaagcaggagccctgtcgacagtgt
ctgacgttggagcaggaggagaaggacaatgaggctgtcagtaagatgatggcgcttgac
cagaagaaccagctgctcaaccttttccatgagaagaaccggcccatgctctcaaagtgg
cctcagaacacggatgttctgtatgtggttcctctgttcttcgtggaggagtggaggaag
ttcatcaggaggcccaccaaatcttctccagtgtctaatgtggggaacagcctcctgctg
tgccctcatggggggttcatgttcacctacgactcgttgatcagcggcgaggcacagcat
atagctctgctctggcccagcgagtgggaagtcatcagcagactcttcatcgtggatcag
gccatatccatccactgcctccgagagagcacagagggctccaccccccagtacaccacc
cagcccgagctgtgctgggactgcagggagagctttttgttccagcagcagaaggacctc
agagagtataatcaagccaccatctacatccgcaaagtcctggaggacgccaggatggta
aaggacatgactccagaaatgaacgccagcagctccgaggctgaggaggagcgggaggag
catatgaaggtggaaggaggcgaagacccagactttggtcagtcgtccctgcttcagtct
caggacggggcgaagcgtctgaggctggccgacggcaccgcagcacctgcgcctcctcct
gtgaccacctcagccaaagtgggcgggatcaggaggagcactcgacatcggaaactgcga
ggggagaaagcactgattgtatcagccaatcagacgctaaaggagctgaagatacagatc
atgcacgccttctccgtggcaccgtttgaccaaaacctctccattgatgggaagagcctg
acggatgactcggccacactaggcagtctaggcgttgtcccagagagcatcatatgctta
aaggctgacgagcccatcgcagattacgccgccatggatgacgcctatcaagtgaggctc
ccagaggaggggttcaaaggaacggggcttctgggacactga
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integrated database retrieval system
