Oryzias melastigma (Indian medaka): 112144582
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Entry
112144582 CDS
T07439
Symbol
zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112144582 (zbtb40)
04121 Ubiquitin system [BR:
oml04121
]
112144582 (zbtb40)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112144582 (zbtb40)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112144582 (zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-C2H2_jaz
Zn_SUZ12
BTB_KLHL33
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-MYST
zf-C2H2_15
CARD_2
zf-C2H2_6
Ribosomal_60s
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
112144582
NCBI-ProteinID:
XP_024124929
Ensembl:
ENSOMEG00000001431
LinkDB
All DBs
Position
LG5:complement(14370029..14378598)
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AA seq
889 aa
AA seq
DB search
MTCRQAEPISVLHRMSPSSKRLKLKNRGPTPTTSTVAMMELPNYSSQLLQQLWALRKEGH
LCDCTILVGDTHHHAHKLVLAASSMLFRSLLDGSDTISIDTSVVSSQEFACLLDMLYTGK
LPLGKYNVGRIVTAADNLQMFDVAVGFKSVLSTLVNQQNPVPTKPEQTTRLSESSKVQTE
SSEGSVTPSKDKPAAAVEEKEKEKEEEKKEEKEDKGEEEEQRSCTDDNEGPASKKARVDP
VDLTGPDQTSGDAEKDHCTPSETPCKKATEGLLKHASPLKEFLATVPSVQELLSKAAENL
LNEKESEVVCCCCQEADPTSAAEKLVSRVKDGGISEGGMLQLLRAVKKKAPSSFPSSLLP
LLEGGEISAPASPPEAADSGQSDSREEEQPDVKDEDQNKEEEEEEEEEEEAGSTSPSKRF
SCRWCKRNFEYKCRMIAHMKRCSMSNQREQQCPQCPEKLANQRALRRHQAEAHPTPTRSR
KKVSCDLCGRSFAHPSGMLYHKRTEHFDERPFACDECGAKFGANSSLKNHMRLHTGERPY
LCKHCDMSFSVAAALAYHTKKKHSEGKMYVCQYCKAVFAQSIELTRHVRTHTGDRPYVCR
ECGRGYSQASGLTVHLHTFHNMAEPHDCQKCCLSFPSLEEHQQHLQEFHPKDFHKCTMCD
KMFSSPALLEKHRATHVGSKPFSCELCNKSYQQLSGLWYHNRTNHPDVFASHTRQLKTLV
QCDVCFKFFPSAASLSRHRTADHQDSETSVMRCLFCKEVLDEQLQEHVCKQHMSQSGDAF
SCPLCSLICSSMLELQEHLLSSHMDQESSADQQASTSSVVDSAEGVAKDKKVESKKPSEG
QQQVGMGRQVLVALPNGGGAGEVVEVNMYELLDNSVTFVCGEKTSEPDS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgacatgcagacaagccgagcccatttccgtgctacaccgcatgtcgccatcttcaaaa
cgtttaaagttgaagaatcggggccccacccctaccacctccacagtagccatgatggaa
ctacccaactacagcagccagctgctgcagcagctgtgggccctgaggaaggagggccac
ctctgcgactgcaccatcctggtgggggacactcatcatcatgcccacaagctggtgctg
gctgcctccagcatgctcttcaggtcactcctggacggatctgacaccatctccatcgac
accagcgtggtgtcttcgcaagagtttgcttgcctcttggacatgctctacacgggaaaa
ctgcctctgggaaaatacaacgtcggtcgcatcgtaacggccgcagacaacctgcagatg
tttgacgtggctgtcggctttaaaagtgtcctctccacactggtgaaccagcagaaccct
gtcccaaccaagcctgaacaaaccacaagactcagcgagtccagcaaagtccagacggaa
agctcagagggctctgtaacccccagcaaagacaagccggctgcagcagtagaggaaaag
gagaaggagaaggaggaggaaaagaaagaggagaaagaagataagggggaggaagaggag
caacgttcctgcacagatgacaatgaagggccggcaagcaaaaaagcccgtgtggaccca
gttgacctcacagggccggaccaaacctcgggggatgcagaaaaagaccactgcactcct
tcagagacgccgtgcaaaaaagccactgagggtctccttaagcacgcctctccgcttaag
gagttcctggcgactgtgccctcagtccaggagcttctaagcaaggcagcagagaatctc
ctgaatgagaaggaaagtgaggtcgtctgttgctgctgccaggaggcagaccccacctct
gccgcggagaagctggtgagcagagtgaaggatggagggatctctgagggagggatgctt
cagctcctccgggcggtgaaaaagaaggcaccatcctcctttccctcatcgctgctccct
ctgctggagggtggggagataagtgcgccagcttccccgccagaagcagcagactcaggg
cagagtgattccagagaagaggagcagccggatgtcaaggacgaagatcagaacaaggag
gaagaggaggaggaggaggaggaggaggaggcaggctctacctccccgtccaagcgtttc
tcctgtcgttggtgtaagaggaacttcgagtacaagtgccgcatgattgcccacatgaag
cgctgctccatgtccaatcagcgcgagcagcagtgtcctcagtgcccagagaagctggcc
aatcagagagctctgcggcgccatcaggccgaggctcaccccacccccacacgcagcagg
aagaaggtgtcctgcgacctctgtgggcggagctttgcacatccatcaggtatgctctac
cacaaacgcacagagcactttgatgagaggccgttcgcctgcgacgagtgtggtgccaag
ttcggggccaactcctctctgaagaaccacatgaggctgcacactggagagaggccgtac
ctttgcaagcactgcgacatgagcttcagcgtggccgccgcgctggcttaccacaccaag
aagaagcactctgagggaaagatgtacgtgtgtcagtactgtaaggctgtttttgctcag
tccatcgagctcacgcgccacgtccggactcacaccggggaccggccctacgtctgccgg
gagtgtggcagaggctacagccaggccagtggccttactgtccacctgcacacctttcac
aacatggcagaaccgcatgattgtcagaagtgctgcctcagcttcccctctctggaagaa
caccagcagcatctccaggagttccacccaaaggatttccataagtgcaccatgtgcgac
aagatgttcagcagccccgccctgctggaaaagcacagggccacccacgttgggagcaaa
ccattttcctgtgagctctgcaacaagtcctaccagcaactgtccggtctttggtaccac
aaccgaaccaaccaccccgacgtgtttgccagccacacccgacagctcaagacgctggtc
cagtgtgacgtctgcttcaagttcttccccagtgcagccagcttgtccagacaccggact
gctgaccaccaagactccgagacatctgtcatgcgctgtctcttctgtaaggaggttctg
gacgagcagctgcaagagcacgtgtgcaagcagcacatgagccagagcggcgatgcgttc
agctgcccactctgctccctgatctgcagctctatgctggagctgcaggagcacctgctg
tcctcccacatggaccaggagagcagtgcagaccagcaggcctccacctcctccgtggtt
gattcagcagagggagtggccaaagacaaaaaggtggaatctaagaaaccatcagaagga
cagcagcaggtggggatgggccgacaggttctggtcgctctcccaaacggaggtggggca
ggtgaagtggtggaggtgaacatgtacgagctgctggacaactctgtcacctttgtctgc
ggggaaaaaacgtctgagcctgactcgtag
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integrated database retrieval system
