Oryzias melastigma (Indian medaka): 112144619
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Entry
112144619 CDS
T07439
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112144619 (magi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
HTH_65
Motif
Other DBs
NCBI-GeneID:
112144619
NCBI-ProteinID:
XP_024125001
Ensembl:
ENSOMEG00000009890
LinkDB
All DBs
Position
LG5:complement(17859981..17972247)
Genome browser
AA seq
1729 aa
AA seq
DB search
MSKPGVKKPHWTSRVNECAVIKDARGDLNVSLRGGAEHGEFAVIGPINESLVIYKNGRLN
EGELLLEVENLSISGLPLYDVESVIRNCKGPVRLKTVRPGSKLNKDLKTYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRAPRDQEVHGVDYNFLSVEDFLKLEKSGTLLEIGTYDGN
YYGTPKPPVQPPGGKVISNSSSGGDVPLLVGLNSSLPGSQNSTPRRAKSYNDMHNAGIGF
GEPQLEDDEDLPDMNSSITGDSSELDEIHQSVRPFVPRQSDLSYSGTTPSPSATTESTQQ
THPHLSHPPQEDQLGPLPENWEMAYTDSGEVYFIDHNTKTTSWIDPRCLDKPQKPLEECE
DDEGVHTEELDNDLAELPPGWERIDDPVYGVYYVDHINRKTQYEHPVLEAKKRRQLEQQP
QPQSQQPPEGERYIREWIEDSALAGAPLTSYAANHETYRDPQTGPTVPNAMGQKRGKPFF
TRNRSELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVVDGPAALDGKMETGDVI
VSVNDICVLGYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAILDNK
DPIIVNGQEVTNSYDSSASYSSQSTYNGPTNSGAPLNGLPRPISPSTEATSDTSSQLGYS
SDVVTLASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLREGDI
IVEVNKRNVQSMSHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLDYVDAAPPYRDYT
RMQLSRKDSQNSSQHSVSSHRSAHTDSPVHQSLAAPLNESSAPPPPSQPLPGLPAQDSQG
DGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGH
IVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTSYAV
KAEGDVPPSPASSHHSSNQAPSLTEDMGKRTLQGSQNSLNTVSSGSGSTSGIGSGGGGTG
MPVGGNAVVAAASANSTSSQPPNSTSIAPSSALQPYDVEIRRGENEGFGFVIVSSVSRPE
AGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKE
AGNTVTLRIIPGDESSNASLLTNADKIATITTTHTPQQQAAPEARTNTKPKQESFDYKPP
QAPLPQPPAQPSPAQDGEFYSVDLERDNKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNG
KMRVGDEILEINGESTKGMKHARAIELIKNGGRRVHLVLKRGDGSVPEYDGNVVDGVSAN
TATGLQNAAEVSTLPPNDASSELSFPPEPQQPSRSKEPTNRSEGTGKHHRSKHRHHSPTK
TSKGKHKRTKSPGKSGPKLNKKKDSKENDQHHSSGHHRRRHRSPNKGHRSRSADNNLDTR
HRGQRRGRSPERRHGQHSSSNHRNRSPRRSPNRSPRRSPYRSPHRSPRRSPHRHRSPYRP
RYHSPNRRRYHSSDPYRNPSPYRQTRGNEKPNVDEAVLREPIHTPEPSFGFDDTILRETP
ALDRLNRDSTLQPLGREDRLFGESSLLAKASTMDRAYRLRDIPSRGQPNDYRDPVLPRVR
TPDFDSAYQKYSTLLRGRSPALTERDGRYGSRDSTPQPRYRARSLGRDISPVRTFRRDDS
EDEEDDDNFVAEQVREYYSTLKTNTTRSSKPSLPEPKKTYKENPKDLSI
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccggggtgaagaaaccgcactggacttccagggtaaacgagtgcgccgtg
attaaggatgcacgcggggacctgaacgtgtcgctgcgcggcggcgcggagcacggcgag
ttcgcggtcatcggacccataaacgagagtctggtgatttacaaaaacgggagattaaac
gagggggaactgctgctggaagtggagaacctctccatttcgggattacccctgtatgac
gtagagagcgtgataagaaactgcaaaggacccgtcaggttaaaaacggtcagaccagga
agcaaactgaacaaggacctaaagacttacttgagccaacgcttccagaaatcgtcgcct
gaccatgagctgcagcagaccatccgtgacaacctttaccgccacgcagtgccttgtact
acacgtgctccacgggaccaagaagttcatggtgtggattacaacttcctctcggtggag
gattttttaaagttggaaaaaagtggaacccttctggaaataggaacatacgacggcaac
tattatgggacgcccaagccaccggtgcagccccccggtgggaaagtgatcagcaatagt
agtagtggcggtgatgtgccactgctggtcgggctcaacagtagcctgccgggctcgcag
aactccactcctcgacgcgccaagtcctacaatgacatgcacaatgctggaatagggttt
ggagagccgcagctggaggacgacgaggacctccctgacatgaacagcagcatcacagga
gactccagtgaattagacgaaattcatcagtcagtgcgccccttcgtccctcgccagagt
gacctgtcctactctgggacgaccccttcgccatcggccaccacggagagcacacagcaa
acacaccctcacctgagccatcctccccaagaggaccagctgggacctctgcctgaaaac
tgggagatggcctacaccgacagtggagaggtctactttatagaccacaatacaaagacg
acctcttggatagaccctcggtgcctggacaaacctcagaaacccctggaagaatgtgaa
gatgatgaaggggttcacacagaggagctggataatgatctagcagaacttccaccagga
tgggagagaatagatgatccagtgtatggtgtctactatgttgatcatatcaacaggaag
acccagtatgaacatccggtgctagaagcgaagaagcgccggcagctcgagcagcagccc
cagccccagagccagcagccacctgaaggtgagcgctacatccgagagtggatcgaggac
tctgcactggcgggggctccactgaccagctatgccgccaaccatgagacctacagggac
cctcagacaggccccacagtgcccaatgccatgggacaaaagcgtggaaagcctttcttt
actagaaatcggtctgaactcaaggggacctttatcaataccaaactgaagaagagccgc
cgtggtttcggtttcacggttgttggaggagacgagccagacgagttcctgcagataaag
agcctagtcgttgacggacctgctgcccttgatgggaagatggagacaggtgacgtgatt
gtgagtgtcaatgacatctgcgtgctgggctacacacacgcccaggtggtgaagatcttt
cagtccatccccattggctccatggtgaatttggagctgtgtcgtggatacccgctgccc
tttgaccccgacgacccaaacaccagcttggttacctcagtcgctatcctcgacaacaag
gatcccatcatcgtcaacggccaggaggtcaccaacagctatgattcttcagcctcctac
agcagtcaaagcacttacaatggcccaaccaatagtggggcgcctctcaacggcctgccc
cgacccatcagcccctccacagaggccacctccgatacatcctcccaacttggctactct
agtgatgtagtgaccctggcctcctctattgcaacgcaaccagagctgatcactgtacac
atggagaaaggagacaagggctttggcttcacaatcgcggacagccccggtggcggaggg
cagagggtgaagcagatcgtggactatccgcgctgccgtggcctcagggagggggacatc
atagtggaggtgaacaagaggaacgtgcagagcatgtcccacaaccaggtggtggacctg
ctcagcaagtgtccgaaaggcagtgaagtcaccatgctggtgcagagaggagtggcacct
gcaaagaagagccccaaactggactatgttgacgcggcccccccgtacagagattacact
cgcatgcagttgtcgaggaaagacagccagaacagctcacagcacagcgtctccagccat
cggagcgcccacacggactcacctgtgcaccagtccctggcggccccgctcaacgaaagc
agcgctcccccgcccccgtcgcagcccttgccaggattacccgcccaagactcccaaggg
gacggcaccatccagagaaaaccagatccctttaagatctgggcccagtccaggagcatg
tatgaaagtaggcttccagacttccaggagcaggacattttcctgtggaggaaggacacc
ggcttcggattcaggatccttggaggcaacgagccgggagagcctatctacatcggccac
atagtaaagtacggcgctgcagatgaagatggacgcctgcgatccggcgatgaactgata
tgcgtggatgggacggcagtggtgggaaagtcgcaccaactggtggtgcagctgatgcag
caagctgccaagcagggccacgtcaacctcactgtgagacgcaaaaccagctacgccgtc
aaagcagaaggagacgtgcccccatcgccggcgtcctcccaccacagcagcaaccaggcg
cccagcctgacggaggacatggggaagcgcaccttgcagggcagccagaactccctcaac
accgtcagctccggcagcggctccacctccgggatcggcagcggcggaggaggaacgggg
atgccggtcggcgggaacgccgtggtcgccgctgcgtctgccaacagcacctcctcgcag
cctccaaacagcacctccatcgccccctcctccgctctgcaaccgtacgacgttgagatc
cgccgcggcgagaacgaaggattcggcttcgtcatcgtttcctcagtgtcacggccggaa
gcgggcaccacttttgctggaaatgcatgtgtggccatgcctcacaaaatagggcgaatc
attgaggggagcccagcagaccgctgcgggaagctgaaggtcggcgaccgcatcctggcc
gtgaacggatgctccatcaccaacaagtcccactcggacatcgtcaacctcatcaaggag
gccggaaacaccgtcacgctacgcatcatcccaggagacgagtcatcaaatgcatccctg
ttgacgaacgcagataagatcgccactataaccacgactcacactcctcagcagcaggct
gctcccgaagccaggaccaacaccaaacccaaacaggaatcctttgactacaaacccccc
caagcgcccctgccccagccccctgcacagccctcgcctgcccaggatggagagttctac
tccgtagatctggagcgagacaacaaaggcttcggcttcagtctgcggggaggcagagag
tacaacatggacctgtacgtgctgcggctcgccgaggacggagcagctgtgcgcaacgga
aagatgagggttggcgacgaaatcctggagatcaacggcgagagcaccaaaggtatgaag
cacgctcgggccatcgagctcatcaagaatggaggccgccgagtccatctggtgctcaag
aggggtgacggctctgtgcctgaatatgacggcaacgtcgtcgacggcgtctcagccaac
acagccacagggttacaaaacgctgcggaagtgagcacgctgcccccaaatgatgcatca
tcagagttgagctttccaccagaaccccagcaaccatctcggagtaaggagccaaccaac
cggtctgaagggactggcaagcaccatcgttccaaacaccgtcaccattcccccacgaaa
accagcaagggaaaacacaagaggaccaagtccccaggaaagagcgggcccaagctaaat
aagaagaaggattctaaggaaaatgaccagcaccattcaagcggacaccatcgaaggcgt
caccgttcacccaacaaagggcacaggtcgcgcagtgcagacaacaacctggatacccgg
cacaggggccaaaggcgaggccgctctccagagaggcgccatggtcaacattcctcctct
aaccatcgcaaccgctctcctcgccgctctcctaaccgttcccctcgtcgctctccttac
cgttctcctcaccgttcacccaggcgctcgcctcatcgccacagatccccttaccggcct
aggtaccactcccccaacagacgtcggtaccactcctctgatccctaccggaatccctcg
ccatacaggcaaacccgtggcaacgagaagcctaatgtagacgaggcggtattgagggag
ccgatccatactcctgaacccagcttcggttttgatgacaccatcctacgtgagacacca
gccttggaccgcttgaacagggacagcactctacagcctttaggaagagaggatcgcttg
ttcggggagagcagcctactggcaaaagcctcaaccatggatagagcctacaggctgaga
gacataccatcccgtggccaaccgaatgattacagagaccccgtcctgcccagagttcgc
actcctgactttgattccgcataccagaaatacagcacactgttgaggggtcgttcacct
gcacttacggaaagggacgggcgctatggcagtagagatagcacgcctcaacctcgctac
agagcccgcagtctgggccgagacatctccccagtcaggaccttcagaagggatgactca
gaggacgaagaggacgatgacaattttgtagcagaacaagttagagagtactacagcacc
ctgaagaccaacaccactcgctcgtcaaagccctcgctccctgaacctaagaaaacctac
aaggagaatcccaaagacctgagcatctga
DBGET
integrated database retrieval system
