Oryzias melastigma (Indian medaka): 112144626
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Entry
112144626 CDS
T07439
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112144626
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
112144626
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
CCD97-like_C
Adaptin_N
Cnd3
HEAT
Cohesin_HEAT
HEAT_2
DUF2711
TFCD_C
Motif
Other DBs
NCBI-GeneID:
112144626
NCBI-ProteinID:
XP_024125020
LinkDB
All DBs
Position
LG5:complement(5280674..5324984)
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AA seq
1457 aa
AA seq
DB search
MWGEIDPPVKTQQSSHNIEPETEVPDKPVDFSRICDQNRRIETQQPPQDFQSESSLVNAM
LTDVAMSGSQVRSQQIGEAELTLGERRQELLQQFRSRPLVFLERYHACLKPEHLPAFSHV
SSDPRAQHYSKVVLTRAAGSTNRTRVRNHRYAALRALQKEGKYFSEEEMRRREPLLYEQY
IGQYLTDEEVIERSQEAMSDGVDEGQGAPGSSTGGLANLLLNSYQERLIQNRLQEEQERE
DGAQEEEEDEEEDIYFSNEDLMKIREAAVFLVHSILRLLQTFPLKDRPETASNFTQIFCQ
LLHFEPVLGEITFAAPRDVAEMRSIPEMAFYGLELLCSAKHGDQKESLRRVFHQLLYVIL
MMNKESRGKPVLRVLSQSVLAIRDYAIQFVCHLVEEQREQAKPFLDILLQHICFQIVEKS
EYRSHGAQAVGMLTSQMENADYSRFIRWLFNFSRQPKMVHRLFSVDVVMALLEQPERRLE
ECQDPELATFLPQKFLIQDLLFARRMDDSPTVQGHALSCLAQCLELPSLNVTRAVHNLFS
TTGTQTGLDSELTGVPSCTQSNMKSLPFRTVEISSADNSSSDAAKENLALLLRRVKDSKT
NVRKAALQALLGLLKHDVVPPTWENLETLSERTRDPAVSVRKKALQCVEELLSAKAECST
VQKVWLQGVLPAVVDSESSVQEKALDALEKVLLSQIKPYSASHHMDTNQRLTWDLLGLLS
HECRNLSRYFNRTFTIWSKQNKFTPAFITNLMSHFKADHAAGAWLLLSKVATSCPKLPCG
KILDSWDALIKSRDVDVTTFCHILSVVGDIAVHLNNDTKKRIVVDLMSLLKSFTLSLELI
SAAVQTLYQLGCQESIKQTQAFLDEHCGELLSICEAYLSAVILNENGAQDFDEELMIKHL
HTLGVTSLQCPAKVSKKTVLLVESVLTADSDNLPDCQNDVPPSLPLSQFQVNSLPPRIKA
HGVLTFGKLCLQREELVHKYLPVFARELEVGKEVAVRNNVVVVMCDLCVRYTNIVDHYIP
DISACLRDDEAVIREQTLIMLTNLLQEEFVKWKGSLFFRFMMALVDPVPAIASLCEYCLL
HLLLKKNPEMFSQHFIECIFHFNSYNKHKSYNKFPQTEREKVLFSLKGAQHREKRFRIYR
FLLEHFTDAQRFNTSNKINQTVLACFADEELPLDADGAEILSETFTILSLKEMKLQATSA
GGAAGEEPEEENMARAVLQAAQKKVMSQVQKKAFVENTIPLVISLKNLLEQRRSPVLKDL
MAYLQVMMQGYRNEVKEFFSGDEQLAAEVEFALKTMEKEKEMQEQMENCSLREERAKPPT
AQGSVPSSPLKQSRMLALNFTTPQPPRPHPQMVRRPMTDSRVCRSRPEECSISKSIALEG
TGRLSEALKDRAFSTPKGTNVQITFHEGLSAIYSDQASTASGEASVLHMRPDEQENAGPK
FWNVQSPLRQKKRSSKV
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtggggagaaatcgaccctccggttaaaacccaacaaagttcccataatatcgaaccg
gagactgaagtaccggataaacctgtggacttctcccggatatgcgaccagaacagacgg
atagagacccagcagcccccgcaagacttccagagcgagtccagcctcgtgaacgcgatg
ctaacggacgtggccatgagcggaagccaggtgaggagccagcagatcggggaggctgag
ctgacgctcggggagcgcaggcaggagctgctgcagcaattccgcagcaggccgctggtg
ttcctggagaggtaccacgcctgtctgaagcccgaacacctccctgcgttttcccacgtc
agctccgaccccagagcccagcactacagcaaggtggtgctgacgcgagcggccggctcc
accaacaggaccagagtcaggaaccatcgctacgccgccctccgagctctgcagaaagag
ggaaagtatttcagcgaagaggagatgcggaggagagagcctctgctgtacgagcagtac
attggccagtacctgacggacgaagaggtgatagagcgctcacaggaggccatgtcggac
ggcgtggacgagggtcagggagcgcccggcagcagcacaggaggacttgccaacctcctc
ctgaactcctaccaggagaggctcatccagaaccgactgcaggaagagcaggagagggag
gatggtgcacaggaggaagaggaagatgaggaggaggatatttacttctcaaatgaagat
ctgatgaagatcagagaagcagctgtttttctggtccacagcattttgaggctcctgcaa
acatttccactcaaagaccgtccagaaactgccagcaacttcacgcagatcttctgtcag
ctgcttcactttgaacctgtccttggtgaaattacctttgctgctccacgagatgttgct
gaaatgaggagcattccagagatggctttctatggacttgagctgctctgctcagccaaa
catggagaccagaaagaatctttgcgcagggtcttccatcagctgctctacgtcatactg
atgatgaataaagaaagtcgagggaagccggtcctccgtgttctcagtcagagtgttttg
gccatcagggattatgccattcagtttgtttgtcatttggtggaagagcagagggagcag
gcaaaacctttccttgacattctgctgcagcacatctgcttccagattgtggaaaaatca
gagtaccgaagccacggagcccaggctgtgggaatgctgacgtctcagatggaaaacgca
gattacagccgcttcattagatggctgtttaatttctccagacaaccaaagatggtccac
cgactgttctccgtggatgtggtcatggctttgctggagcagccagagagaaggctggag
gagtgtcaggatccggagctcgccacctttctgccacagaagtttttgatccaggatctg
ctgtttgctcgaaggatggatgactctcccaccgtccaaggccacgccctttcttgcctg
gctcagtgtttagaactgccctcactcaatgtcaccagggccgtccacaacctcttttct
accactgggactcagacgggactggacagtgaactcactggagtaccttcctgcacgcag
agcaacatgaagagtctgcctttcaggacagtggagatcagcagtgccgacaactccagc
tctgatgcagcaaaggaaaacctggctcttcttcttcgccgtgtgaaggactcaaagacg
aacgtcaggaaggcagcgctgcaggccttgttgggtctcctgaagcatgacgtggttccg
ccaacctgggagaatctggaaactctgtcagagcgaaccagagacccagctgtgtctgtg
aggaagaaggctttgcagtgtgttgaagagctgctcagtgccaaagcagagtgcagcaca
gtccagaaggtgtggctgcagggtgtgctgccagcagtggtggactctgaaagctcagtc
caggagaaggcattggatgctctggaaaaagtgctgctcagtcaaatcaaaccgtactct
gccagccatcacatggatacaaatcagaggcttacatgggacctgcttgggttgttgtcc
catgaatgcagaaacctgagccgttatttcaacagaaccttcaccatttggtccaagcag
aacaagttcacgccagctttcatcactaacctgatgtcacactttaaggccgatcatgct
gcaggagcctggctgctgctttccaaagtcgccacttcatgtcccaaactcccatgtggt
aaaatcctggactcgtgggatgcattgatcaagtcaagggatgtggatgtgacaaccttc
tgtcacatcctatctgttgtgggagacatcgctgttcatttaaacaatgataccaagaag
aggatagttgtggacctaatgtctttgttgaagagtttcactttgtctctagagctgatc
agtgcagctgtgcagactctttatcagcttggctgtcaggagagcatcaaacagacccag
gcttttctagacgagcactgtggcgagctcttgtctatttgtgaagcttatttatccgct
gtcatcctgaatgaaaatggagcccaggactttgatgaagaactgatgataaagcatctc
catactctgggtgtgacatcacttcaatgtccggcaaaagtcagcaagaagactgttctg
ttggtggaatctgtgctgacggcagattctgacaacctgccagattgccagaacgatgtc
ccaccttcactgcctctgtctcagttccaagtcaactctttacccccccggatcaaagcc
cacggagtcttgacttttgggaagttgtgtctgcagcgggaggagctcgtccacaagtat
ctgccggtttttgccagagagctggaggtcggcaaagaggtcgctgtgcgtaacaacgtt
gtggtggtcatgtgtgatctttgtgttcgatacaccaacattgtggaccattacatccct
gacatctctgcctgtctacgagacgacgaggccgtcatcagggagcagactctgatcatg
ctcactaacctgctgcaggaggagtttgtcaaatggaagggctccttattcttccgcttc
atgatggcactcgtcgacccagtccctgctattgccagtttgtgtgagtactgtctactc
cacctgctgctcaagaagaacccagaaatgttcagtcagcacttcattgagtgcatcttc
cacttcaactcctacaacaaacacaagtcctacaataagttccctcagactgagagggaa
aaagttctgttctccctgaaaggagctcagcaccgcgagaagcgctttcggatctatcgc
ttcctgttggagcacttcacagatgcacagcgcttcaacacctccaacaagatcaaccag
actgttttagcatgctttgctgatgaggagctgcctctggatgcagacggtgctgagatt
ttatctgagacatttaccatcttgagcctaaaggaaatgaagcttcaagctacatctgct
ggaggtgctgcaggagaagaaccagaggaggagaacatggccagggctgtcctgcaggct
gcacagaagaaggtgatgtcacaggtccagaagaaggctttcgttgagaacaccattccc
ttagtcatcagcctgaagaacctgctggagcagagaagatctcctgtcctcaaagacctc
atggcctacctgcaggtgatgatgcagggataccgcaatgaggtgaaggagtttttctct
ggagacgagcaactggcagcggaagtggaattcgctctgaagacaatggaaaaggaaaag
gagatgcaggaacagatggagaactgcagcctgagagaagaaagagcaaaaccaccaacc
gcacagggttcagtccccagctctccccttaagcagagtcgcatgctggctttaaacttc
accacaccacagcctcctcgtccacacccacagatggtcagacgacctatgactgactcg
cgggtgtgcagatctagaccagaagagtgcagcatctcaaaatccattgccctggaagga
acagggaggctaagcgaagctctgaaagatagagccttcagcacacccaaaggcacaaac
gttcaaataacatttcatgaaggcctcagtgcaatctacagtgaccaggcatcgaccgcc
agtggagaagccagcgtccttcacatgagaccagatgagcaggaaaatgctggtccaaag
ttctggaatgttcagtctcctttgcgccagaagaaaagatcttccaaagtgtag
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integrated database retrieval system