Oryzias melastigma (Indian medaka): 112144657
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Entry
112144657 CDS
T07439
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112144657 (brpf3a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
112144657 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
DNA_topoisoIV
FYVE_2
Striatin
C1_1
Motif
Other DBs
NCBI-GeneID:
112144657
NCBI-ProteinID:
XP_024125074
Ensembl:
ENSOMEG00000022556
LinkDB
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Position
LG5:28794697..28808080
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AA seq
1223 aa
AA seq
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MRKVKTWECKTVLSKVNMGRGRGRGRGRGRGSSSHLRPPSPYRLQLSPSRETLTYAQAQK
IVEVDLDGRLHRINISDPLPVITEDEMMAQDIVECNSNKENSEQTQSKSKSWRKPSNSKS
KKNAKNTSDQNRRSGLQQHTGSNSCQHSSHQSPLPEPTFQVLSSVSLSEAPPLPAAYYRY
IEKSVEEQDNVAEYDMDEEDLAWLEMVNQKRVSDGHASVSPNTFELLIDRLERESILESR
SQALSQNSVDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYVPEGQWLCRCCL
QSPSRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGVKNIPPAR
WKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQKAGLFMKIDPVRETGVNGTTFSVKKT
AFCEHHSPVGTRRDGSGDESVEGRLVGGRGNRGQRSYTQSTPSPPNKKTVKGQKKKNTKG
SGSTRRSSVPVLLVPQIPSHRLNKICTGVEVQRKNQFMQRLHNYWLLKRQSRNGMPLIRR
LHSHLQAHKTAEQREPDEKLSAAREELRYWQKLRQDLERARLLVELIRKRERLKREQMKI
QQAVLELKLTPALTLLRYTLDQLEEKDTAKIFSQPVNLSEVPDYLEFISQPMDLSTMRTK
LEGHAYCSVADLEKDFNLMISNCLKYNSKDTMFHKAALQLREVGGAILRHAHRQSQSIGL
DPSTGMHLPEAPNKHGFYHCTWDDVDTLLDPDNRVHLTTDEQLKALLDKLDMVASMRTSG
GRTKRIRLLRKEINALRQKIGQQNAPSRSNGDDEGKEEEDDEEVKTKGKKKEKASTNEGL
RSKVSNSRTDDSPPVLELSCPVSSPLPGDAPLEPPVLGIVTGGQRSPGRSYKRQRSSRSG
SRSQGEDEAEIGETPSSQPEAVHEVTPLGKPPSGPPVGVGRRTSVLFKKAKNGVRMAKSK
SLPQQNGKTSEAKATRLDSAPSSPNALPPTPTAPPSSHHLRSRGPSCESEPDKPPPHPKE
EGRAGLTNGKHSAVDQDEEDEEEEEDESNLSVSPPKRSRGKPALAKVPSKENGDISGSGK
STLLSLDSETELSPLDLVWAKCRGYPSYPAMIVDPDMPQEGLLHNGIPIPVPPVEVLKLG
ESRETEEGQKLFLVLFFDTKRTWQWLPRSKLLPLGRDDTVDKLRLMEGKKPSVRKSVHTA
YDRAIVHLNHVRGNLNFTPSNFI
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggtgaagacgtgggaatgcaagactgtcctcagtaaagtcaacatgggaagg
ggtcgaggcagagggagaggaaggggcagggggtcgtccagtcatctgaggccgccctcg
ccctacagactacaactctctccatccagggagaccttgacgtacgctcaggctcagaaa
atagttgaagtggacttggatggaaggctccaccggatcaacatctcagaccctctgccg
gttatcacggaggatgaaatgatggctcaggacattgttgaatgcaacagcaacaaggag
aacagcgagcagactcagagtaaaagcaagtcgtggcggaaaccctcaaacagcaaaagc
aagaagaatgctaaaaatacatctgatcagaaccggcggtcgggattgcagcagcacacc
ggatctaattcctgccagcactcatctcaccaaagccctttgcctgagcccacctttcaa
gtgctgagttcagtttcactgtcagaggctcctcctctcccagcagcctactaccgttac
atcgaaaagtccgtggaggaacaggacaatgttgcagagtacgacatggacgaggaggac
ttggcctggctggagatggtaaatcagaagagagtctctgatggtcacgcgtccgtatca
ccaaacacttttgaactcctgattgaccgcctggagagggaatccatcttggagtcccgc
agccaggctttgtcccagaattcagtagatgaggatgctttctgctgtgtttgcctggat
gatgaatgtctcaacagtaacgtcattctgttctgcgatatctgcaacctggccgtccac
caggagtgctacggtgtcccctatgttcccgaaggacagtggctttgccgctgctgcctg
cagtccccctctcgccctgtagactgtgtactctgtcccaaccgaggaggtgccttcaag
caaaccagtgatggacggtgggcccacgttgtctgtgccatatggatcccagaggtgtgc
ttcgctaacacggtgttcttggagcccattgaaggggtgaagaacatcccccctgctcgc
tggaagctcacgtgctacctgtgtaagcagaaaggcaggggggcatcgatccagtgccac
aaagccaactgctacagggctttccacgtcacctgcgcccagaaggcggggctgttcatg
aagatcgatccggttcgagaaacgggtgtgaacggcaccaccttctccgtgaagaagacc
gctttctgtgagcaccactcgcccgttgggacccggagagacgggtctggagacgagtct
gtggaggggaggctggtgggagggaggggcaaccggggtcagaggtcatacacacaaagt
accccctccccgccaaacaaaaagaccgtcaaaggacagaagaagaagaacactaaagga
agcgggtcaacacgtcggtcgtccgtccccgtgctgctcgtaccacagatcccctctcac
aggttaaataagatctgcacaggagttgaagtccaaaggaaaaaccagttcatgcagagg
cttcataactactggttactaaaacggcagtcccggaacggcatgcctttaatacgccga
cttcactctcacctgcaggcgcacaagacagcagaacagagggagcctgacgagaagcta
agtgctgctagagaggagctacgatactggcagaagctgaggcaagacctggaaagagct
cggcttctggttgaactcatccgcaagcgggagaggctgaagagagagcagatgaaaatc
cagcaggctgttcttgagctgaagttgactcctgcactgacgcttctgcgatacactttg
gaccaactagaagaaaaagacacagccaagatcttctctcagcctgtcaatctatcagag
gtcccagattacctggaattcatatcccaacccatggacctgtccaccatgcgcaccaaa
ctggagggacacgcctattgctcggtcgcagacttggagaaagacttcaatctcatgatt
tctaactgtctcaaatacaactccaaggacaccatgttccacaaagcagctctacagctg
cgggaggtgggcggagccatcctgcgtcacgcccacaggcagtctcagagcattgggctg
gaccccagcaccggcatgcacctgccagaggcaccaaacaagcatggcttctaccactgc
acgtgggacgacgttgatactcttttggatcctgacaacagagtccacctaaccacagat
gagcagctcaaggccttactggataaactggacatggtggcctccatgcgcaccagtgga
gggcgcaccaaacgcatcaggctgctgcgcaaagaaatcaacgctctgaggcagaagatc
ggccagcagaacgctccctcccggagcaacggcgacgacgaaggaaaagaagaggaagac
gacgaggaggtgaagacaaagggaaagaaaaaagaaaaagcaagcacgaatgaggggctt
cggagtaaagtatcaaactccaggacagatgacagtcctccggtgctggagctcagctgc
ccggtgtcgtcgcctctgccgggggacgcccccctggagccccctgttttgggaatagtt
accggagggcagcggtcgccggggcgttcctacaaacggcagaggtcatcccgcagcggc
agcagaagtcaaggcgaagacgaggccgaaataggagagacgccgtcttcccaaccggag
gccgtccatgaagtcacaccgctgggcaagcccccctccgggcctcctgtcggggtgggg
cgtcgcacgtctgttctgttcaagaaggctaaaaacggtgtgcggatggcaaaaagtaag
agcctccctcagcagaatgggaaaacatcagaagcaaaagccaccaggttggacagcgcc
ccctccagtccaaacgccttacctcctaccccaaccgcccccccttcctcacaccacctg
aggtccagaggccccagctgtgagagtgagccggacaaaccccctccacatcccaaagag
gaaggtagggcaggattgacgaatggaaaacacagcgctgtggaccaggacgaggaggat
gaggaggaggaagaggatgagtcaaacttaagcgtctctcctcccaagcgcagcaggggt
aaaccagcattggctaaagttcccagcaaagagaacggagacatctccgggtctggaaag
tctacacttctgtctttagatagtgaaactgaactttctccactggacttagtctgggca
aaatgtagaggatatccttcatacccagcaatgattgtagatccagacatgcctcaggaa
ggactcctccacaacggcatccccatcccagtgcctcctgtggaagtgctcaaactgggc
gaaagcagagaaacggaagaaggccaaaagctcttcctggtgctcttctttgatactaaa
cggacctggcagtggctcccccgcagcaagctgctgccgctggggagggacgacaccgtc
gacaagctccgcctcatggaagggaagaaacccagcgtccgcaagtctgtccacactgca
tacgaccgggccatagtgcatttaaaccacgtgagaggaaatctgaacttcactccctcc
aattttatatga
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