KEGG   Oryzias melastigma (Indian medaka): 112144682
Entry
112144682         CDS       T07439                                 
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04137  Mitophagy - animal
oml04140  Autophagy - animal
oml04144  Endocytosis
oml04145  Phagosome
oml04148  Efferocytosis
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112144682
   04145 Phagosome
    112144682
   04140 Autophagy - animal
    112144682
   04137 Mitophagy - animal
    112144682
   04148 Efferocytosis
    112144682
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112144682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112144682
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112144682
   04031 GTP-binding proteins [BR:oml04031]
    112144682
Membrane trafficking [BR:oml04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112144682
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112144682
  Exosomal proteins of other body fluids (saliva and urine)
   112144682
  Exosomal proteins of colorectal cancer cells
   112144682
  Exosomal proteins of bladder cancer cells
   112144682
GTP-binding proteins [BR:oml04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112144682
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 AAA_16 Septin AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT AAA_14 NB-ARC SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 112144682
NCBI-ProteinID: XP_024125119
Ensembl: ENSOMEG00000010156
LinkDB
Position
LG5:complement(32558552..32569736)
AA seq 207 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
EPYPDFPESIKLDPNDRAKASADSCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcttccaggaagaaagtgctgttgaaagtcatcattctgggagattctggtgttgga
aagacttcactaatgaaccaatatgtgaacaaaaaatttagcaaccagtacaaagccaca
ataggagccgatttcctgaccaaggaggtgatggtggatgacagactggtaacgatgcag
atctgggacacggccggtcaggagaggttccagtctttgggggttgccttctaccgtgga
gcggactgctgcgtcctggtttttgatgtgaccgcccccaacaccttcaaaactctcgac
agctggagggacgagtttctaatccaggccagccctcgagatcccgagaactttcccttt
gtggttctaggcaacaagatcgatctggagaacagacaggtgaccaccaaaagggctcag
gcctggtgtcagagtaagaacaacatcccttactttgagaccagcgccaaagaagccatt
aatgtggagcaagcattccagacaatcgcacgcaacgccctcaaacaggagacagaagtg
gagccgtatcccgacttccccgagtccataaagctggatccaaacgacagagccaaagct
tctgcggacagctgcagctgctga

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