Oryzias melastigma (Indian medaka): 112144698
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Entry
112144698 CDS
T07439
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112144698 (prom1a)
04090 CD molecules [BR:
oml04090
]
112144698 (prom1a)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112144698 (prom1a)
CD molecules [BR:
oml04090
]
Proteins
112144698 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF7217
DUF3587
Motif
Other DBs
NCBI-GeneID:
112144698
NCBI-ProteinID:
XP_024125139
Ensembl:
ENSOMEG00000002864
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Position
LG2:complement(21449277..21536411)
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AA seq
899 aa
AA seq
DB search
MLEIGTLLLLLLPVFPVSGELQQETEQRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGIL
FHLVQTFLRAVQPNAFPHDLIVKLAKDKFGAIQTEYQKPENIVLTLQAIYYEIGFLVCAA
VGLLFAILMPLVGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVL
CSYASNQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKNKVIYDLNNIG
PLLGGRIHQELHKEVHPALDQVLNMAGAMRETREALENVSVSLVVLQEGTGKLSSDLSRV
RSSINRTLSHPDCHDEESDATTVQLCSSIRQSLPQLQIGANFTRLPNVNSQLERINEVVK
TDLSAVVQRGFSSLNDTPHMVIEQTRSVVDSVQSLVDGIGNNISSFSKVFPVQSFLSNYT
IFISHAHAKIEDYYPEIDKIDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYDKHASPT
TRGCISNTGGTMLMAGVGFSFIFSWVLMGVVTILFLAGGNMEKLVCEPFHNKELFKVVDT
PYLINPEWKNFIPGYLYNDSELELTVESLYSTCKQNRGIYSAMHLDKIFNMSSYLNTTVF
TKDVVDKLERVKIDLRGIILLEAEGKQNLRDFSEVGLSEINYADYLEEVNKGVTEVDLLS
FTRELESQADLMPRGPLQTALKNHVGTLQQIHRQQVLPMEQTMKYVRARSALNQSIRFLE
RTASDLSNKVIAVLDAVEAAQYLISQNVTLLINQETRKYTATIIGYFHQYIEWVKASLAM
EVAPCKPFSNILDTAEIMSCSFLVDSMNVFWMGLGCSTLFLLPSVIFAVKLAKYYRRMDT
EDVYDDTETIAMKNMEMGNNGYHSEISRGIPKVVMTSIPTYDTMNRFPRASAPPRHIDW
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatcgggactctgctgcttctgctgctgccggtgtttcctgtgtccggtgaa
ctccagcaggagacggagcagcggaggctcccgcctccgggaaagttggatttcggttat
gtgcccgcgggagtttacgagactctggcccattacgagccgggacccattggaattctg
ttccacttggtgcaaaccttcctgcgcgccgtgcagcccaacgctttccctcacgatctc
atcgtcaaactggcaaaggacaagtttggagccattcagacagaatatcaaaagccagag
aacatagtgctgacccttcaggccatctactatgagataggcttcctggtgtgtgcggcg
gtgggcctgctcttcgccatcctcatgcccctcgtggggctatttttctgcatgtgccgc
tgctgtgacaactgcggcggcgagatgcaccaacgccagaggaagaacgcagactgccgg
cgcggcctgctgggaacgctcctcttctccacgtcgctcgtcatcacgattggggtgtta
tgttcatacgcttccaaccagaacctgagctcccaggtgaagaacattcgacgcctcgtc
aacagcaacatgagagacctgcacacctttgctaatgacacaccaatgcaaattgattac
ctaatatctcaatatgcaacagccaagaacaaagtcatctatgacctaaataatataggc
ccattgctgggtggaaggatacaccaagaactgcataaggaggtccatcctgccctggac
caagtccttaatatggctggagccatgcgagaaaccagggaggccctggagaacgtcagt
gtgtccctggttgtcctccaagagggaacggggaagctcagctctgacctgagccgggtc
cgcagcagcatcaacagaaccctcagccaccccgactgccatgatgaagagtcagacgcc
accacagtgcagctgtgcagcagcatccgccagtcactgccgcagctgcagatcggcgcc
aatttcacacggctgcccaatgtgaactctcagcttgaacggataaatgaagtggtgaaa
acagacctcagtgctgttgtccagaggggcttctcctctttgaacgacacgccacacatg
gtgatagaacagacacgaagtgttgttgacagtgtgcagagtttggtggatgggattggc
aacaacatcagcagcttctccaaagtatttcctgttcagagtttcctgtccaactacacc
atcttcatcagccacgcacacgccaagatcgaggactactacccagaaattgacaaaatt
gacttctacaggtggataggctgcattgccctttgctgcatggtggttctggtgttggcc
ttcaactacctgggactcctgtgtggcaccctgggatacgacaagcacgcctcgccaaca
acacgaggatgcatttccaacactggagggaccatgcttatggcaggcgttggatttagt
ttcatcttctcctgggtgctgatgggagtggtgacgatcctgttcctggctggaggaaac
atggaaaaacttgtctgtgagccgttccacaacaaagagctcttcaaggttgtggacacg
ccgtatctaatcaaccccgagtggaagaacttcatccctggttacttgtacaacgactcg
gagctggagctgacggtggaaagcttgtacagcacttgtaagcagaacagggggatctat
tctgccatgcatctggacaaaatcttcaacatgtcgtcttacctgaacacaactgtgttc
actaaggatgtggtggacaagctggaacgtgttaagattgacctgagagggataatcctg
ttagaggcagaagggaagcagaacctccgggatttctctgaagtggggctgtcagagatc
aactatgctgactacctggaagaggtgaataaaggagtcactgaggtggatctgctctcg
ttcaccagagagctggagtctcaggcggacctcatgcccaggggtcctctgcagaccgcc
ctgaaaaaccacgtcgggactctgcagcagatccacagacagcaggtccttcccatggag
caaaccatgaaatatgttagagccaggagcgctctaaaccaaagtataaggttccttgaa
agaacggcctctgacctttcgaacaaagtcatagcagttcttgatgctgttgaagctgct
cagtacctcatctcccagaatgtgacacttttaatcaatcaggaaacaagaaaatacaca
gccaccataattggctacttccatcaatacatagaatgggtgaaagcatctttggcaatg
gaggtagcaccatgcaaaccattcagcaacatcctggacacggcggagatcatgtcctgc
agcttcctggtggactcgatgaacgttttctggatgggtctgggctgcagcacactcttc
ctgctcccgagtgtcatctttgcagttaaactcgccaagtactaccgcaggatggataca
gaggatgtttatgatgacactgaaacaattgccatgaaaaatatggaaatgggtaataat
ggttatcatagtgaaatctcacgaggaattccaaaggttgtgatgacgagcatccccacc
tatgacaccatgaacaggttcccacgggcctcggctcctccgaggcacatcgactggtga
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