Oryzias melastigma (Indian medaka): 112144720
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Entry
112144720 CDS
T07439
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112144720 (chl1b)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112144720 (chl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Fn3_VIN3
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
112144720
NCBI-ProteinID:
XP_024125201
Ensembl:
ENSOMEG00000001197
LinkDB
All DBs
Position
LG5:complement(4385307..4494363)
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AA seq
1166 aa
AA seq
DB search
MTQQRGSGLVALLTALNCFFAFPLAAAMDIPLEVLTHANIEQLPTITAQSPGAVIALPFE
ESFTVSCEAKANPEPEFRWTKNGREFDPSLDPLLRTEESSGTFVIPNNGNLTEYQGTYRC
FASNKLGTTVSQEIEFIVPKIPKFPKEVFEPVVVEEGQPFILKCDPPKGIPPLQIYWMTI
NLQHIEQDDRVSMGLNGDLYFSHAEEKDSRRDYCCFAAFPKIRTIVQKNAMSVVVSTRKS
ESPNGANSILQRKPSLLTPPGVGSEAVLVKGEDLKLECIAEGIPTPKVEWVKMGHRLPDK
ARLENHGKVLVIPRAEQDDGGKYMCKAKNPLGEVVHYFTVTIEEPPEYVVEPQSQLSMIG
ADVVIKCSVGGSPQPVTTWRVNGVPLHESPAENRKIFDDTIIIQNAQTSDSAVYQCEASN
KHGKILTNANIMIMNLFPIILTSDEEEYSAVEEQGVMMHCKVFSSPPSTIFWSKDDSSEL
VTGSRFTVHNNGSLEIHTVEKGDTGQYTCLAKNLEGTSAINAMLYVKDPTKIVAPPQDQW
VLIGTDAQLSCLVEFDESFGSSFELLWEKDDEEISPNNTEHSSRYFIEDGVLHIANVSHR
DQGEYRCVAKTPVDRDAASAQLIVLDVPDAPWSVALSERKNRSVKLRWTPGEDHNSSVTE
FVIEFEENKWQPGSWRELQRVPGNHNSAILDLHGHIGYRFRVYAVNAVGAGRPSEPTERY
LTPPAAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYRRQDVEDEWKEHT
VKRHSFVVRNTPTFVPYEIKIQTKNHQGWGPEPKMVTGYSGEDFPSAAPDDVAVEVMNSS
VVKVTWKQVPKDKLHGHLGGYRVNWWRLRSLLHSKKSHGEKHTAAFPGSRSHGTVSGLVP
FSEYSLIVMSFNGRGNGPGSHPVIFKTPEGVPEKIPVFRVTDVQKRSISLAWTPPLEPNG
ILTGYLLEYQLINDTEEAGPLQTEDIRNPDTTKWLLRDLEPLSKYRFQLRSCTSEGCGTV
VSLESTTLETSLASVHAGISSQGWFIGLMSAIALLTLVVLVACFVNRNKGGKYSVKEKED
LHPDVESQGINDDTFCEYSDNDEKPLKGSQHSLSGGLKAEDSGDSLVDYGDDDVQFNEDG
SFIGEYAAKKEKRASAEIKATAQTPA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcaaagaggctcaggattggtcgctctgttgaccgccctcaactgttttttt
gcctttcctctggctgcagcgatggacatcccactggaagttttaactcacgcaaacatc
gagcagctgcccaccatcacggctcagtctcctggcgccgtcatcgccctgcccttcgaa
gagagcttcaccgtgtcgtgtgaagctaaagcgaatcccgagccagagttcaggtggaca
aagaatggccgggaattcgacccctccctggaccccctcctgaggacagaggagagttct
gggacctttgtgatacccaataatggaaacctgacagagtaccagggaacgtaccgctgc
ttcgcctccaacaagctggggaccacagtctctcaggagattgagttcatagtgccgaaa
attccgaagttcccaaaagaggtgtttgaaccggtcgtggtggaggaaggccagcctttt
atacttaagtgtgacccgcctaagggcatcccccctctccagatctactggatgaccatc
aacctgcagcacatcgagcaggacgaccgggtctccatgggcttgaacggcgacctctat
ttctctcacgctgaggagaaggacagcaggagggactactgctgcttcgccgccttcccc
aagatccgcaccatcgtccagaagaacgccatgtccgtcgtcgtcagcacgaggaaaagt
gagagtcctaacggcgcaaactccatcctgcagaggaaaccctctcttctgacgccccct
ggtgtcggatcagaggcggtgctggtcaagggagaagacctgaagctggagtgcattgca
gaaggaattccaactccaaaagtggaatgggtgaagatgggtcaccgacttcctgacaaa
gccagactggagaaccacgggaaagttctggtcattccgagagctgagcaggatgacggc
gggaagtacatgtgcaaagccaagaacccacttggagaagttgtccactatttcacagta
actattgaagagcctccagagtatgtggtggagccgcagagccagctcagcatgatcggc
gctgacgtggtcatcaagtgctcggtcggcgggagcccccagcccgtcaccacgtggagg
gtcaacggcgtgcctctgcatgagtccccggcagagaacaggaagatatttgacgacacc
atcatcatacaaaacgcccagacgtcggacagcgccgtgtatcagtgcgaggcctccaac
aagcacgggaagattctgaccaacgccaacatcatgatcatgaatctgttccccatcatt
ttgaccagcgatgaagaggagtactctgcagtggaggagcagggcgtgatgatgcactgc
aaagtcttcagctcgccgccttccaccatcttttggagtaaagatgattcttccgagttg
gttacgggatctaggttcacggtacacaacaacggctcactggagatccacaccgtcgag
aaaggcgacacgggccagtatacgtgcttggccaaaaatctagaaggaacctcagcaatc
aacgccatgctttatgtaaaagatcccaccaagatagtggcccccccacaggaccagtgg
gtcttgattggcacggatgctcagctctcctgtctggtcgagttcgacgagtcctttggg
agctcctttgagctcctttgggaaaaagacgacgaggagatttcccccaacaataccgaa
cattccagcagatacttcatagaggacggcgttctgcacatcgccaacgtgagccacaga
gaccagggcgagtacagatgtgtggctaagactcccgttgacagagacgcggcgtcggcc
cagctcatcgttttggatgtccccgacgcgccctggagtgttgccctgtctgagcgtaag
aacagaagtgtgaagctgcggtggacccctggagaagaccacaacagctctgtcacagaa
ttcgtcattgagtttgaagaaaacaagtggcagccgggcagctggagggagctgcagcga
gtgccgggcaaccacaactccgccatcctggacctccacggccacatcggctaccgcttc
cgcgtctacgccgtcaacgccgtgggggcggggcggcccagcgagcccacggagcgatac
ctgaccccccctgcagccccggacaagaaccctgaaaatatcaaaatcgaaggtcatttg
ccacatgaaatggatatcaactgggagcccctgtcgcccatcgagcacaacggccccggt
ttggagtacaaggtgagctacaggcggcaggacgtggaggacgagtggaaggagcacacc
gtcaagcgccactccttcgtggtcaggaacacaccgacgtttgtgccgtacgagatcaag
atccaaaccaagaaccatcagggctgggggcccgagcccaagatggtgacgggatactca
ggagaggactttccctctgctgcgcccgacgatgtagccgtggaagtgatgaacagctca
gtggtcaaggttacctggaaacaagtacccaaggacaagctgcacggacacctgggaggc
tacagggtaaactggtggcgcctgcgcagcctgctgcactcaaagaaaagccacggggaa
aaacacacggccgccttcccgggcagccggagccacggcacggtttcggggctggtgccc
ttctctgagtatagcctcatcgtgatgtccttcaacgggcgcggaaacggcccgggcagc
caccccgtcatcttcaaaaccccagagggagttcctgagaaaatcccagtttttagggtc
acagacgttcagaagcggtccatatctctggcttggacccctcctctggagccaaacggg
attctcactggatacctcctggagtatcagctcatcaatgacacagaggaggcggggcct
ctccagacggaggacatcaggaaccccgacactaccaagtggctcctgcgcgacctggag
cctttgagcaaatacaggttccagctgcgctcctgcaccagcgagggctgcggaaccgtc
gtcagcctggagagcacaaccctggaaacaagtctcgccagcgtccacgccggaatatcc
agccagggctggttcatcggcctgatgagcgccatcgctctcctcacgctggtcgtgctg
gtcgcctgcttcgtcaacaggaacaaaggggggaagtattcagtcaaagaaaaagaagac
cttcacccggacgtggagtcccagggaataaatgacgacactttctgtgaatacagtgac
aacgacgagaagcccctgaagggcagccagcactcgctgagcgggggcctcaaggcggag
gacagcggggacagcctggtggactacggcgacgacgacgtgcagttcaacgaggacggc
tccttcatcggcgagtacgcggcgaagaaggagaagagggcgtcggcggaaatcaaagcg
acggctcaaaccccggcgtga
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