KEGG   Oryzias melastigma (Indian medaka): 112144722
Entry
112144722         CDS       T07439                                 
Name
(RefSeq) contactin-4
  KO
K06761  contactin 3/4/5/6
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112144722
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
    112144722
Cell adhesion molecules [BR:oml04515]
 Immunoglobulin superfamily
  Contactins
   112144722
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
 Others
  112144722
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Tissue_fac
Other DBs
NCBI-GeneID: 112144722
NCBI-ProteinID: XP_024125206
Ensembl: ENSOMEG00000001186
LinkDB
Position
LG5:complement(4178681..4335349)
AA seq 1020 aa
MKMLLPWELLILLSLTDCLAENARHGPVFSQEPSDIVFPMSTGDNLVIINCKAKGNPPPH
YRWKVNGEDIDTHSDSNYRLLEGNLLISNPDFISHGGVYQCIATNVFGTIVSRDARVQFA
FLQSFSRKPRNPVSVREGQAVVLLCAPPSHHGEIKYSWVFNRELRPLQQDARRFISQKTG
NLYIAKVEAPDAGNYTCAVRNMMTNSSEFSSPTPLVVRRDVIMGEYEPKIEVRFPETLHI
SKGMSVKLECFALGNPVPSISWRRADGNPLPAKIKINHSVLEIPYFRPEDGGIYECVAEN
NRGQNVAKGKLIFQNVEHLHWGQTLKDAQMAIDANLLWECRAFGEPRPTYRWLKNGHPLT
TQWRIHMEANTLTISKIALSDSGMYQCIAQNAFGSIHASAELKVVASPPDFTRRPVKKST
VLQRGGELVLECRPDASPRATISWWRGGDLLRGGGRQMIMEDGTLRVANITKSDEGRYMC
VARNHFGAASSSGSLAVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPVFKWFFNG
KAIDFSRQDHFEMIGGGFVGDLMVRNVQLKHAGKYVCMVQTEVDTVSAAANLIVRGPPGA
PEAPSVTDIADTTVKLSWGPGPDNHSTITMYMVQARTPFSIGWQTVKTVPDSVPGQMMHA
SVTDLIPWVDYEFRVVAVNVVGVGEPSTPSEPIRTKPAVPRVAPINVSGGGGAQGELVIT
WEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTALASPDASRYVYRNDSIPPLSQFEVSVGV
YNSVGEGPFSQVVKVLSSEGEPTEAPSGMRGRAASASEIVVFWEPVPPRSTNEIISYELL
FWEEGSLQSDAGRVRVPSNNTALLSGLKASTVYQISVRAQNSAGLGPCSPAINITTRKPP
PSRPPGSVEWSLTNSKIFLNWEPVKASANESEVTGYKVEYRQNWNSRTAVLETNKTSIEL
QIPTGEDHVIEIKAVTEGGDGTSSGPIRIPKMSSLNSRGCRNMVTRSLMLFGFLSSLLNF
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgaagatgctgttgccatgggaactgttaattcttctgtcactcacagactgccttgct
gaaaatgctcgccacggtcccgtcttctcccaggaacccagtgacattgtattcccgatg
agcacaggtgataacttggttattatcaattgcaaagccaaaggaaacccacctcctcac
tacaggtggaaagtaaatggagaggacatagatacacactccgactcaaactatagactt
ctagaggggaacctgctaatcagcaatcctgattttatcagtcatggaggagtgtatcag
tgcatcgccaccaatgtgtttgggaccatcgtcagccgcgatgcaagagtccagtttgca
tttctgcagagttttagcaggaagcccaggaacccggtgtcggtcagggagggtcaagct
gtggttctgctctgtgcccccccatcccatcatggagaaatcaagtattcgtgggtgttc
aacagagagctccgccccctgcagcaggacgcccgtcgctttatctctcagaagacagga
aatctgtacattgccaaggttgaagcaccagatgctggaaattacacatgtgcagtgaga
aacatgatgaccaattcctcagagttcagctcgccgacgcccctggtggtgcggcgggat
gtgatcatgggtgagtatgagcccaagattgaggtccgttttcctgaaaccctccacatc
tccaaaggaatgtcagtgaagttggaatgctttgctctgggaaatcctgtgccttccatc
tcatggagaagagctgacgggaatccacttcctgcaaaaattaagatcaaccactccgtt
ctggaaatcccgtatttccggccagaagatggtggaatctacgagtgtgttgccgaaaac
aacaggggacaaaacgttgcaaaagggaagctgatatttcagaatgtggaacatctacac
tggggccaaacactaaaagacgctcaaatggccattgatgctaacctactgtgggaatgt
agagccttcggtgagcccaggcccacctatagatggttgaagaacggacatcctcttacg
acgcagtggaggatccacatggaagccaacacactgacaatatccaagattgctctgtca
gactctgggatgtatcagtgcatcgcccagaatgcctttggatctatccacgccagtgct
gagctcaaggttgtcgcatcgccgcctgacttcacgcggaggccggtgaagaagtccacg
gtcctccagagaggcggagagctggtgctggagtgtcgccctgacgcatcacccagagcc
accatctcatggtggagagggggggatcttctgagaggcggtgggagacagatgatcatg
gaggacgggacgctccgcgttgccaacattaccaagtcggatgagggcaggtacatgtgt
gtggccagaaaccactttggagcggcaagcagctcggggtcgctggcggtgaaagagccc
accaagatcatcgctccacctctaagttcagacgcctctgtgggacagagtctggtgctg
ccctgcgaggttgccagtgattccaccctcagccccgtcttcaagtggtttttcaacggc
aaagctattgatttcagcaggcaggatcactttgagatgattggagggggatttgtgggc
gacctgatggtgaggaacgtccagctgaagcatgctgggaagtacgtgtgcatggtgcag
accgaggtcgacaccgtctctgctgcagcaaacctaatcgtcagaggccctccaggggcc
ccggaggccccatcggtgacggacatcgctgataccactgtgaagctgtcctggggcccc
ggacctgacaaccacagcaccatcaccatgtacatggtgcaggcaaggacgcccttctct
atcggctggcagactgtaaaaacagttcctgattctgtgcctggacagatgatgcacgcc
tctgtgactgatctgatcccctgggtggattatgaattcagggtggtggcagtcaatgtg
gttggtgttggagaacccagcacgccatcagaaccaatccggaccaagccagcagttccc
agggtggctccaattaatgtgagtggcggtgggggagcgcagggagagcttgtgattacg
tgggagccagtcccggaggaacaacagagtggagaggattttggttatgttgttgctttc
cggcctctcggcagcagcacctggatccagactgcgctggcatcacctgacgcatccaga
tacgtgtaccgaaacgacagcatcccgcctctgtcccagttcgaagtgtccgtgggcgtg
tacaacagcgtcggtgaggggccgttcagccaagtggtcaaagtgctgtcttcagaagga
gaacccacagaggcgccgtcaggcatgcgaggccgcgccgcgtcggcctcagagatcgta
gtgttctgggagccggttcctcccaggtccaccaacgagatcatttcatacgagctcctc
ttctgggaggaaggatctctgcagagtgacgcgggcagagtcagagttcccagcaacaac
acggcccttctctctggcctgaaggccagcacggtttatcagatctccgtcagggcccag
aacagcgccggactcggaccctgcagccccgctatcaacatcaccaccaggaaacccccc
cccagtcggcctcctgggagcgtcgagtggagcctgaccaactccaagatatttctaaac
tgggaacccgtgaaggcatcagcgaatgagtccgaggtcacgggatacaaggtcgagtat
cgtcagaactggaacagcagaaccgccgtactggaaaccaataagaccagcatagagctg
caaatccccaccggggaagaccacgttattgagatcaaagccgtgaccgaggggggcgat
ggcaccagcagcggtccgatccgcataccaaagatgtccagccttaactccagaggatgc
aggaatatggtgacgaggtctttgatgctttttggttttctttcttcacttctgaacttc
tga

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