Oryzias melastigma (Indian medaka): 112144722
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Entry
112144722 CDS
T07439
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112144722
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112144722
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Contactins
112144722
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112144722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
112144722
NCBI-ProteinID:
XP_024125206
Ensembl:
ENSOMEG00000001186
LinkDB
All DBs
Position
LG5:complement(4178681..4335349)
Genome browser
AA seq
1020 aa
AA seq
DB search
MKMLLPWELLILLSLTDCLAENARHGPVFSQEPSDIVFPMSTGDNLVIINCKAKGNPPPH
YRWKVNGEDIDTHSDSNYRLLEGNLLISNPDFISHGGVYQCIATNVFGTIVSRDARVQFA
FLQSFSRKPRNPVSVREGQAVVLLCAPPSHHGEIKYSWVFNRELRPLQQDARRFISQKTG
NLYIAKVEAPDAGNYTCAVRNMMTNSSEFSSPTPLVVRRDVIMGEYEPKIEVRFPETLHI
SKGMSVKLECFALGNPVPSISWRRADGNPLPAKIKINHSVLEIPYFRPEDGGIYECVAEN
NRGQNVAKGKLIFQNVEHLHWGQTLKDAQMAIDANLLWECRAFGEPRPTYRWLKNGHPLT
TQWRIHMEANTLTISKIALSDSGMYQCIAQNAFGSIHASAELKVVASPPDFTRRPVKKST
VLQRGGELVLECRPDASPRATISWWRGGDLLRGGGRQMIMEDGTLRVANITKSDEGRYMC
VARNHFGAASSSGSLAVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPVFKWFFNG
KAIDFSRQDHFEMIGGGFVGDLMVRNVQLKHAGKYVCMVQTEVDTVSAAANLIVRGPPGA
PEAPSVTDIADTTVKLSWGPGPDNHSTITMYMVQARTPFSIGWQTVKTVPDSVPGQMMHA
SVTDLIPWVDYEFRVVAVNVVGVGEPSTPSEPIRTKPAVPRVAPINVSGGGGAQGELVIT
WEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTALASPDASRYVYRNDSIPPLSQFEVSVGV
YNSVGEGPFSQVVKVLSSEGEPTEAPSGMRGRAASASEIVVFWEPVPPRSTNEIISYELL
FWEEGSLQSDAGRVRVPSNNTALLSGLKASTVYQISVRAQNSAGLGPCSPAINITTRKPP
PSRPPGSVEWSLTNSKIFLNWEPVKASANESEVTGYKVEYRQNWNSRTAVLETNKTSIEL
QIPTGEDHVIEIKAVTEGGDGTSSGPIRIPKMSSLNSRGCRNMVTRSLMLFGFLSSLLNF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgttgccatgggaactgttaattcttctgtcactcacagactgccttgct
gaaaatgctcgccacggtcccgtcttctcccaggaacccagtgacattgtattcccgatg
agcacaggtgataacttggttattatcaattgcaaagccaaaggaaacccacctcctcac
tacaggtggaaagtaaatggagaggacatagatacacactccgactcaaactatagactt
ctagaggggaacctgctaatcagcaatcctgattttatcagtcatggaggagtgtatcag
tgcatcgccaccaatgtgtttgggaccatcgtcagccgcgatgcaagagtccagtttgca
tttctgcagagttttagcaggaagcccaggaacccggtgtcggtcagggagggtcaagct
gtggttctgctctgtgcccccccatcccatcatggagaaatcaagtattcgtgggtgttc
aacagagagctccgccccctgcagcaggacgcccgtcgctttatctctcagaagacagga
aatctgtacattgccaaggttgaagcaccagatgctggaaattacacatgtgcagtgaga
aacatgatgaccaattcctcagagttcagctcgccgacgcccctggtggtgcggcgggat
gtgatcatgggtgagtatgagcccaagattgaggtccgttttcctgaaaccctccacatc
tccaaaggaatgtcagtgaagttggaatgctttgctctgggaaatcctgtgccttccatc
tcatggagaagagctgacgggaatccacttcctgcaaaaattaagatcaaccactccgtt
ctggaaatcccgtatttccggccagaagatggtggaatctacgagtgtgttgccgaaaac
aacaggggacaaaacgttgcaaaagggaagctgatatttcagaatgtggaacatctacac
tggggccaaacactaaaagacgctcaaatggccattgatgctaacctactgtgggaatgt
agagccttcggtgagcccaggcccacctatagatggttgaagaacggacatcctcttacg
acgcagtggaggatccacatggaagccaacacactgacaatatccaagattgctctgtca
gactctgggatgtatcagtgcatcgcccagaatgcctttggatctatccacgccagtgct
gagctcaaggttgtcgcatcgccgcctgacttcacgcggaggccggtgaagaagtccacg
gtcctccagagaggcggagagctggtgctggagtgtcgccctgacgcatcacccagagcc
accatctcatggtggagagggggggatcttctgagaggcggtgggagacagatgatcatg
gaggacgggacgctccgcgttgccaacattaccaagtcggatgagggcaggtacatgtgt
gtggccagaaaccactttggagcggcaagcagctcggggtcgctggcggtgaaagagccc
accaagatcatcgctccacctctaagttcagacgcctctgtgggacagagtctggtgctg
ccctgcgaggttgccagtgattccaccctcagccccgtcttcaagtggtttttcaacggc
aaagctattgatttcagcaggcaggatcactttgagatgattggagggggatttgtgggc
gacctgatggtgaggaacgtccagctgaagcatgctgggaagtacgtgtgcatggtgcag
accgaggtcgacaccgtctctgctgcagcaaacctaatcgtcagaggccctccaggggcc
ccggaggccccatcggtgacggacatcgctgataccactgtgaagctgtcctggggcccc
ggacctgacaaccacagcaccatcaccatgtacatggtgcaggcaaggacgcccttctct
atcggctggcagactgtaaaaacagttcctgattctgtgcctggacagatgatgcacgcc
tctgtgactgatctgatcccctgggtggattatgaattcagggtggtggcagtcaatgtg
gttggtgttggagaacccagcacgccatcagaaccaatccggaccaagccagcagttccc
agggtggctccaattaatgtgagtggcggtgggggagcgcagggagagcttgtgattacg
tgggagccagtcccggaggaacaacagagtggagaggattttggttatgttgttgctttc
cggcctctcggcagcagcacctggatccagactgcgctggcatcacctgacgcatccaga
tacgtgtaccgaaacgacagcatcccgcctctgtcccagttcgaagtgtccgtgggcgtg
tacaacagcgtcggtgaggggccgttcagccaagtggtcaaagtgctgtcttcagaagga
gaacccacagaggcgccgtcaggcatgcgaggccgcgccgcgtcggcctcagagatcgta
gtgttctgggagccggttcctcccaggtccaccaacgagatcatttcatacgagctcctc
ttctgggaggaaggatctctgcagagtgacgcgggcagagtcagagttcccagcaacaac
acggcccttctctctggcctgaaggccagcacggtttatcagatctccgtcagggcccag
aacagcgccggactcggaccctgcagccccgctatcaacatcaccaccaggaaacccccc
cccagtcggcctcctgggagcgtcgagtggagcctgaccaactccaagatatttctaaac
tgggaacccgtgaaggcatcagcgaatgagtccgaggtcacgggatacaaggtcgagtat
cgtcagaactggaacagcagaaccgccgtactggaaaccaataagaccagcatagagctg
caaatccccaccggggaagaccacgttattgagatcaaagccgtgaccgaggggggcgat
ggcaccagcagcggtccgatccgcataccaaagatgtccagccttaactccagaggatgc
aggaatatggtgacgaggtctttgatgctttttggttttctttcttcacttctgaacttc
tga
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integrated database retrieval system