Oryzias melastigma (Indian medaka): 112144724
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Entry
112144724 CDS
T07439
Symbol
acap3b
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112144724 (acap3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112144724 (acap3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112144724 (acap3b)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112144724 (acap3b)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112144724 (acap3b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112144724 (acap3b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_4
Ank_3
Ank_5
PH_21
PH_8
PH_11
TPR_TTI1_N
LMBR1
SOS1_NGEF_PH
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
112144724
NCBI-ProteinID:
XP_024125207
Ensembl:
ENSOMEG00000018838
UniProt:
A0A3B3CJ48
LinkDB
All DBs
Position
LG5:complement(10579332..10655467)
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AA seq
843 aa
AA seq
DB search
MTVDFEECIKDSPRFRAGIDDVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
VKDLSQQCKKEEMISECLEKCGERLQEIVNYHMILFDQAQRSIKQQLHTFIKEDIRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALILSRKAFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYTLFQQGFNILDEIDPYMKKLAAQLDQLVIDSAMEKRELEHKH
AIIQQRTLMQDFSYDDPKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQSSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYKDIADNYYIERLDRTASPSTSSIDSASEPRERGERADKGLRGGGESLLQRVQSL
PGNELCSDCGQAAPCWASINLGVLLCIECSGIHRSLGVHFSKVRSLTLDSWEPELLKLMC
ELGNTVINQIYEGTCDALGLKKPGPSSSRQEKEAWIKAKYVEKRFLKKLSGSEALVEGER
KSRPWTVKKCHRHNSSVRAPHKARRKYHRYEPGGAAPANLSAAAAAKFRRDSLFCPDELD
SLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEDEESEESSSGEVE
IEQEISSDPEDPRELHPGALLHRSARLHNLPLMAEALAHGADVHAATEEEGKTPLIQAVI
GGSLIACEFLLQNGADVNQRDMRGRGPLHHATYLGHTGQVCLFLKRGASQTEVDEQGHDP
LSIAVQAANADIVTLLRLARMNEEMREAEPLLGQPGQYPSSSPTEQQYRKCIQEFICLTI
DES
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtattaaagattcccccagattcagagccggtattgat
gatgtggagacggatgtggtcgaaattgaggcaaagcttgacaagctggttaagctgtgc
agcgggatgatcgaggccggcagagcctacgtcagcgccaacaagctctttgtgaatggg
gtcaaagatctctcccaacagtgtaagaaagaggagatgatatcggaatgcctggaaaag
tgtggagaaaggctgcaggagatcgtcaactaccacatgattttgtttgaccaagctcag
agatccatcaaacagcaactccacaccttcattaaagaagacatacgtaagttcaaggac
accaagaagcagtttgaccgagtgcgggaagacatggagctggcgcaggtgaagaacgca
caggcacccaggaacaaagtgcacgaggcggaggaggccactcaggccctcatcctcagc
cgcaaagccttcagacacctggccctcgactatgtgctgcagattaatgtgcttcaggcc
aagaagaagtttgaaatcctggatgcgatgctgtccttcatgagagctcagtacactttg
tttcaacaaggtttcaacatcttggatgagatcgatccttatatgaaaaaactggctgca
cagttggaccagctcgtcatcgattctgccatggagaagagagagctggagcacaaacac
gcaatcatccagcagaggactttgatgcaggacttttcctatgatgatcccaagcttgaa
ttcaacgtggacgcgcccaacggggtcgtcatggagggctacctgttcaagagggccagc
aatgctttcaaaacatggaacaggcgatggttttccatccaaagcagccagctggtctac
caaaagaaactcaaggattctttgaccgtggtggtcgaggatctccggctgtgctctgtc
aaaccatgtgaggataatgagagaagattctgctttgaggtggtttcacccaccaaaagc
tgcatgctgcaggctgagtcggagaagctgcgacaggcttggatccaggcggtccaggca
agcatcgcctccgcttacaaagacatcgcagacaactattatatagagcgcttggaccgg
accgcctcgccctccaccagcagcatcgactctgcaagcgagccgcgggagcgcggggag
agggccgacaagggactgcggggaggtggggagagtctcctccagcgggttcagagcctt
ccaggcaatgagctgtgcagcgactgcggccaagcggctccgtgctgggcctccatcaac
ctgggggtgctgctgtgcatcgagtgctcggggatccacaggagtttgggggttcatttc
tctaaagtgcgttcactgacattagactcgtgggagcccgagttgcttaagctgatgtgt
gagttggggaacactgtgatcaatcagatttatgagggaacctgtgatgcattaggcttg
aaaaagcctggaccttcaagctcgaggcaggaaaaagaggcctggattaaagctaaatac
gtggaaaaacgcttcctgaagaagctgagtggcagtgaggctctggtggagggcgagagg
aagtcccgcccctggacagtgaagaagtgccaccgacacaacagctccgttcgggctcca
cacaaggcccgcaggaaataccaccgttatgagccgggcggagcagcgccggcaaacctc
tcagcagcagccgcagcaaagtttcgacgggactccctgttttgtccagatgagctggat
tcgctcttctcctactttgacactggctctggtcctcgcagccccgcaggtctgagcagc
gacagcggcctgggaggaagcacagacggcagcacagacatcctggtgtttggctcggtg
gtggacagtgtaacagaagaagacgaggaatccgaagagtcttccagtggcgaggttgag
attgaacaggaaatttcctcagaccctgaagacccaagagagcttcaccccggggcgctg
ctccaccgctcagcccgtctccacaacttaccactcatggcggaagcactggcacacgga
gctgacgtgcacgccgccactgaggaggagggcaaaacgccactcatccaggctgtgatc
gggggctctttgatagcgtgcgagttcttactacagaatggagccgacgtgaaccagaga
gacatgagaggcagaggaccgttgcaccatgctacctacctgggccacaccggtcaggtg
tgtctgttcctgaagagaggagcgtcgcagacggaggtggatgaacagggtcacgatcct
ctcagcattgctgttcaggctgccaacgcagacatcgtcaccctgttgcgtctggcacga
atgaacgaggagatgcgggaggcggagcctctgctgggtcagccaggtcaataccccagc
agcagccccactgagcagcagtacagaaagtgcatccaggagttcatctgcctcaccata
gatgaaagctag
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