Oryzias melastigma (Indian medaka): 112144814
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Entry
112144814 CDS
T07439
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112144814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112144814
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112144814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
112144814
NCBI-ProteinID:
XP_024125385
Ensembl:
ENSOMEG00000002272
LinkDB
All DBs
Position
LG5:16382279..16415392
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AA seq
349 aa
AA seq
DB search
MDTEGSQSSLSSGTDNSPHDPCKMFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTK
RSRGFGFVTYADQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMTPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTTTYTSRSYSGIAPG
YTYQFPEFHLERTPLLTSSHPHELTAIPLTAYGPMAAAAAAVVRGSTPSRTAGFLGTSSP
GPMADLYAAANQDSGVSSYISAASPAPSTGFGHGLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaagggagccagagcagcctgtcctccggcacggacaactccccccacgac
ccctgcaaaatgttcatcggggggctgagttggcagacaacgcaagagggcttgcgggag
tacttcggcaaatttggtgaggtgaaggagtgcatggtgatgcgggatcccgttaccaag
cggtcgagggggtttggctttgtaacatacgcagaccaagccggagtggaaaaggttttg
gcgcaaaatagacacgaacttgattccaaaacgattgacccaaaggtggcgtttccccgc
cgggcacagcctaagctggtcaccaggacaaagaagatctttgttggaggcctgtcagtc
aataccaccatcgaagacgtcaagcagtactttgaccagtttgggaaggtcgatgatgcc
atgctcatgtttgacaaaactaccaacaggcacagaggtttcggctttgtcacctttgag
agcgaagacgtggtggagaaagtgtgtgagatccactttcacgagatcaacaacaagatg
gtggagtgtaagaaagcacaacccaaagaggtgatgacgccgacgggctcggccagaggt
cgctccagagtgatgccttatggaatggacgccttcatgctgggaatcggcatgttaggc
tatccaggattccagactactacctacaccagccgcagttattctgggattgcccctggt
tacacttaccagttcccagagttccacttagagaggacccccctcctgacatcgtcccac
ccccatgagctgacagccattcccctgactgcgtacggaccaatggcagctgcagccgcc
gcagtggttagaggctccaccccttcgcgcacagctggcttcctgggcacgagcagtccc
ggaccaatggctgatctgtacgctgcagccaatcaggactcaggagtcagtagctacatc
agtgccgccagccccgcccccagcaccgggttcggccacggtttagggggtcctctgatt
gctactgcatttactaatggctaccactga
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