Oryzias melastigma (Indian medaka): 112144854
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Entry
112144854 CDS
T07439
Symbol
phf20a
Name
(RefSeq) PHD finger protein 20 isoform X1
KO
K18402
PHD finger protein 20
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112144854 (phf20a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
112144854 (phf20a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_5
Tudor_3
MBT
PHD
Tudor_2
PWWP
DUF4537
DUF755
Motif
Other DBs
NCBI-GeneID:
112144854
NCBI-ProteinID:
XP_024125455
LinkDB
All DBs
Position
LG5:complement(386741..404389)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSKTPPNRRGITFEVGAQLEARDSLKNWYAANIEKIDYEDEKVLIHYRQWSHRYDEWFDW
TSPYLRPVERVKLRKQGLRDGSSSHGFQVNDKVLASWSDCRFYPAKVISVNKDGGYPQLK
EVHKSTTYTVKFYDGVVQTVKEMHVKPFVKERGGVGSKSRSSDRSSVRRAPSRRDRRPQE
NGGPKNKRVRRSTSDQEEEDSNSEDEGRDQEVENDKSRKTDDELQATHVIKQEEESSEEE
GHSRPGNEEKLTGLTNGVKVEKGEELNKGTGQLNGDLKREDGEKEKTGIKPYTQCTKPYT
ETPGQNLAKAEQASVTMTSTECNGSVEQKPNVQLENTQTLANVPPPQPVKPVRKQGFHNP
NRFSREPLYRVIKNQPPLVLSVNLDHNPFKCTAPGCTKSFRKAKLLHYHMKYYHGEEQPM
EGKHSPTRSVQTRASEKHTAAAGLDASKRRRTISASMHSTVAAAASRGDVKAAGRRTSAP
PAVSTHGQQQRALLREKSKENQLDRISCQLQDSDKSGFDFGSVKDKTKEKPKQKDFLRIK
LKKKKKKKKAKSDHTGSEENIDTSVLGLHSKLNLPLKPPLSHNHKPEAYPSRPGHSYSEQ
IHVDDDDSISDWSTDSCGWSDDDFDMDLDVTTPPLSTDSGAVDTNDQEIVRCICEVEEEN
DFMIQCEDCLCWQHGTCMGLLEDNVPDRYTCYICRDPPGQRQSLRYWYDREWLTNGHMYG
FSFLEENYSHQNAMKITTTHQLLGDVHHVVEVLNGLQLKMSILQNNPDPDLHLWRQPWKH
LERSRINADCCKDSSIVPSPVTPSEDMSRGEILMSNALEKLSRAATAATSSSSSSCSPFP
SFQDSYINSDHCYQKPRAYYPAVEQRLVVETRQASELEDSMRSTEELLEREQCYGSLLEM
EKPKKTGISNKASMGVGLWSQAEKEDGRGTAETGDIKQLQQWQMNLLDHIDAVQEEVSHR
MDFIERELDVLESWLDYTGELEPPDPLARLPQLKQRIKRLLSQLGKVQQIALYSST
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgccccctaacagaagagggataacatttgaggtgggagctcagctcgag
gccagagacagcctcaaaaactggtatgcagccaatatagagaagattgattacgaagat
gagaaagttttaatccattaccgccagtggagccaccgctacgacgagtggtttgattgg
acgagtccctacctgagacctgtagagcgagttaaactgaggaagcagggcctgcgtgat
ggctcctcatctcatggcttccaggtgaatgacaaggttctggcaagctggtccgactgc
cgtttttaccctgctaaggtcatttcagtaaataaagatggtgggtatccccaactaaag
gaggtccataaaagcacaacctacactgtgaagttttatgatggtgtcgtacagacagta
aaggagatgcacgtgaagccttttgttaaagagagaggtggagttggtagcaagtctcga
tcctcagacaggagttcagtaaggagggcgccgagccgcagagacaggaggcctcaagag
aatgggggtcccaaaaacaaacgagtcagacggagcacgtcagaccaggaggaggaggac
agcaacagcgaagacgaggggagagaccaagaggtggaaaacgacaaaagcaggaaaacg
gatgatgaactccaggccacacatgtgatcaagcaggaggaggaatcgtctgaggaagaa
ggtcatagcaggcctgggaatgaagaaaagttgacgggacttacaaacggagtgaaggtt
gaaaaaggtgaagagctaaacaaaggcaccggccagttaaatggagacttgaaaagggaa
gatggggaaaaagaaaagactggaataaagccatacacacaatgcaccaagccatacaca
gagacgcctggtcagaacctagcaaaagcagagcaggcttctgtcacaatgaccagcaca
gaatgcaatggaagcgtggagcagaaaccaaacgtccagttggagaacactcagactttg
gccaatgtaccgcctccccaacctgtaaaacctgtaaggaagcagggcttccacaaccct
aacagattcagcagagagccactgtacagggtcatcaaaaaccaaccgcctctagttctg
tccgttaatcttgaccacaacccgttcaagtgcaccgctccaggatgcacaaagtcattt
cgtaaagcaaagctcctgcattaccacatgaagtactatcacggtgaggaacagcctatg
gaggggaagcacagccccaccaggagcgtccagaccagggcctccgagaaacacactgca
gctgctggcttggatgcttcaaagagaaggcgcaccatctctgcttctatgcactccact
gtagctgctgcagcttctcgtggtgatgtgaaggctgctggcaggcgcacatcagcacca
cctgcagtcagcacgcatggtcaacagcagagggcgctgctgagggagaagagcaaagag
aaccagctggacaggatcagctgccagctgcaggactcagacaagagtggctttgacttc
gggtctgtaaaagacaaaacaaaggagaaaccaaaacagaaggacttcctccgcattaaa
ctcaagaagaagaagaagaaaaagaaagccaagtctgaccacacaggtagtgaggagaat
attgacacttcagtattgggtcttcactccaaattgaatttgccactcaaaccccccctc
tcacacaatcacaaacccgaggcctaccccagcaggcctggacacagctactctgagcag
atacatgtggatgacgacgatagcatcagtgactggtccactgacagctgcgggtggagc
gatgatgactttgacatggatttggacgtcactactccacctctcagcactgactctggt
gctgtggacacaaatgatcaagaaatcgtccgatgtatctgtgaagtggaggaagagaat
gacttcatgattcagtgtgaagattgtttgtgctggcagcacggcacctgtatgggcctg
ctggaggacaacgtcccggacagatacacctgttacatctgcagagaccctccagggcag
aggcagagcctacgctactggtacgatcgagagtggttgaccaatggtcacatgtacggc
ttctccttcctggaggagaactattcccatcaaaatgctatgaaaatcaccaccacccac
cagttgttgggtgacgtgcaccacgtggtggaggtcctcaatgggctgcagctcaaaatg
agcatcttacagaacaacccagaccctgacctgcatttgtggcgtcagccctggaaacat
ttggagaggtctcgcatcaatgcagactgttgtaaagacagcagcatcgtcccgtctcct
gtgacccccagcgaggacatgagtcgaggagagattttaatgtccaacgctctggagaag
ctcagccgcgccgccaccgctgccacctcgtcttcatccagctcctgctcccccttccca
tccttccaggactcctacataaacagtgaccactgttaccagaaaccgcgggcatattac
ccagctgtggagcagcgcctggtggtggaaaccaggcaggcctcagagctggaggacagt
atgagaagcacagaggagctgctggaacgggagcagtgctatggcagcctgctggagatg
gagaaacctaagaagacaggcatcagcaacaaggcttctatgggagttggcttgtggtca
caggctgagaaagaggatggaaggggcactgcagagaccggagatatcaagcagctgcag
cagtggcagatgaacctgctggatcacatcgatgcagtccaggaagaggtctcccacagg
atggacttcattgagagggagttggatgtgctggagagctggctcgactacactggagag
ctggagcctcctgatcccctggcacgtctgcctcagctcaagcaacgcataaagcggctg
ctttcacagctagggaaggtacaacagatcgccctctacagctccacatga
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integrated database retrieval system