Oryzias melastigma (Indian medaka): 112144856
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Entry
112144856 CDS
T07439
Symbol
trnt1
Name
(RefSeq) CCA tRNA nucleotidyltransferase 1, mitochondrial
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oml03016
]
112144856 (trnt1)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
112144856 (trnt1)
Transfer RNA biogenesis [BR:
oml03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
112144856 (trnt1)
Prokaryotic type
112144856 (trnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-GeneID:
112144856
NCBI-ProteinID:
XP_024125463
Ensembl:
ENSOMEG00000003331
LinkDB
All DBs
Position
LG5:37108982..37118573
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AA seq
423 aa
AA seq
DB search
MWSFAVPRLSCISVRNLFTMRLKSRDFQVLFTEGLNGLAELFDKHQYELRIAGGAVRDLL
SGRRPEDVDFATTATPEQMKSIFQSAGIRMINNKGEKHGTITARLHNETFEVTTLRVDVQ
TDGRHAEVEFTTDWQKDAERRDLTINSMFLGLDGTLYDYFSGYEDLQNHRVRFVGRAEQR
IQEDYLRILRYFRFYGRVALKPHEHEPQTLAAIKKHGHGLSLISGERIWAELKKIVVGHH
AADLLELIYNMELAQYIGLPPGGDVDSMKEVWKKSRSLSPKPVTILAALLRCPEDVEKMD
VRLKMSREEKNLALFLVRQRRDLCRDHGEPDGLRPFTDFIIDSRDPDTQSKVCELLKYQG
EEELLSELSCWSSPRFPLSGHDLRKIGITSGKDIGATLLRLRDIWKKSHYKMDKEELLSH
IKL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtttcgcggttcctcgtctgagctgcatctctgtcaggaacctgttcaccatg
agactgaagagccgagacttccaggtgttgttcacggagggactgaacggactcgcagag
ctgtttgacaaacaccagtacgagctccggatcgccgggggagcggtccgggatctactg
tccggaaggcgtccggaagacgtggattttgccacaacagcgactccagagcagatgaag
agtatttttcagtcggccgggatcaggatgatcaacaacaaaggagagaagcacgggacc
atcacggcacgactgcacaatgaaacctttgaggtgacaacgctgcgcgtggacgtgcag
acggacggccgccatgcagaggtggagttcaccaccgactggcagaaggacgccgagcgc
cgagacctgaccatcaactccatgtttttaggactagacggaaccttatacgactacttc
agtggatatgaagacctgcagaaccaccgagtccggtttgtggggagggccgagcagagg
atccaggaggattacctgaggatcctgcgttacttcaggttctatggccgagtggctctg
aaaccgcacgagcacgagccgcagactctggctgccatcaagaagcacggtcacggacta
tctctgatatctggagagaggatctgggcggagctaaaaaagatcgtggtcggtcatcat
gctgctgaccttctggagttgatctataacatggagctggctcaatacatcggtttgcct
ccaggcggagatgttgacagtatgaaagaagtctggaagaagtccagaagcctctctccg
aagccggtcaccatcctggctgctctcctccgctgcccagaagacgtggaaaagatggac
gtccgtctgaaaatgtcccgagaggagaaaaacctggctctgttcctcgtcagacaaaga
cgggacctctgcagggaccacggcgagccggatggcctccgacctttcaccgacttcatc
attgatagccgggatccagacactcagagtaaagtgtgtgaactgctaaagtatcaagga
gaggaggagcttctgtcagaactgagctgctggtccagtcctcgcttcccgctcagcggc
cacgatctcaggaagatcgggatcacctccgggaaagacatcggagcgaccttactgagg
ctgcgggacatctggaagaaaagtcactacaagatggacaaagaggagctcctgtcccat
atcaaactttaa
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