KEGG   Oryzias melastigma (Indian medaka): 112144908
Entry
112144908         CDS       T07439                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112144908 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112144908 (kdm5ba)
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     112144908 (kdm5ba)
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112144908 (kdm5ba)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112144908 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 CCDC28 PHD-1st_NSD
Other DBs
NCBI-GeneID: 112144908
NCBI-ProteinID: XP_024125552
Ensembl: ENSOMEG00000022909
UniProt: A0A3B3CT32
LinkDB
Position
LG1:complement(6082325..6097619)
AA seq 1479 aa
MSQPPLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKIRPPQEWQPPFACD
VDRLKFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTKISVKMGFAPGKAIGSHLRAHYERILYPYNLFQTGANLPKATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERGSFKIEAEEICDNRPNLRRRMG
TCAVKPEPVRMAVTVVKQEPTEHTEPTNYEESKINNINKPAGNKVDQYMCLVCGSGSAED
RLLLCDGCDDSYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPAVAFGFEQASRSYTLQAF
GDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVKN
SHFEVSPDDEHYLTSGWNLNNMPVLDASVLTHITADICGMKVPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGAPGYAAEHLESVMKKLAPELFESQPDLLHQLVTIMNPNTLM
NNGIPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRGCVDHYRQLS
RYCVFSHDEMVCNMALKANTMDVELASAVHEDMKVMVQEEKKLREWASKLGLVLSRRVDY
EELPDEERQCFKCRTTCYLSGVTCACSSDKMVCLYHAQSLCICPLSNLTLNYKFTMDELY
PLMESVKLRSESYKEWLSSVQDIVENKGTKKKGLEELHSLVEQGETKAFPKSSLLDQLRS
ITTEADKVAVMAQQLLNGKRQTRYRSGGGKSQNHNELTVEELRSFVQQLDNLPCNIRQAP
LLKDLLARVDDFHQCSERLLSDESPSPQELQDLLDVSLGLDVELPQLPMLRERLEQARWL
EAVQQASSRPDSLCLDTMRRLIDQGVGLAPHSSVEKAMARLQELLTVSEQWEEKVLSLME
ARPCHSIDTLEAALQEVENIPAYLPNCLQLKDVVTKAKKWLHEAEALQLGGRIPVLESLS
ELVLIAEGIPVRLEPLSRLEALISDVQNWKESAAKTFLLKNTPFTLLEVLCPRCDVGSGS
QKLKSKKLKEISQLVRKSSTKLESVCEIERALSESKDSASAMNTLAEVQQREMGILLALR
DSNEAKFLPAENCSALNVCVCQKAPLGDMVQCELCRDLFHCGCVAMPADLEFGQAWLCPL
CKRSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQACTAGLLSISGN
TWPRKATYLSQEINGGSFYIEHPSLPPQALSPDVEELMLEGFLLQVTLPETEQLYRYLTY
KLTPPPSHCSPSGRGAEQSPRRSPQHNKNGVSRKESLSSQSKRTKRRKDSSDSQHSDKAK
KSRKKKPKKSKERSEEGKRVCSPGHTSSDPAPSDSEEDFSLCAAPWCREPEGDEVNWVQC
DGSCNQWFHQVCVGLSAERAEKEDYICISCTQPDYERGD
NT seq 4440 nt   +upstreamnt  +downstreamnt
atgagtcaaccgccgctgaatgaattcattcctcccccagagtgccctgtttttgagccc
agctgggaggaatttgctgacccttttgcgtacatcaacaaaatacgaccaattgcggaa
aaaacgggcatctgcaaaatccgaccgccacaggaatggcagccgccttttgcctgtgat
gttgacagattaaaatttacaccccgaatacaaagactcaatgagttggaggctcaaacc
agagttaagcttaacttcttggatcaaattgcaaagttctgggagctccaaggatgcact
ctgaaaattcctcatgtggagagaaaaattttggacctataccagctgaataagttggtg
aatgaagaggggggctttgatgccgtctgcagagagcggcgctggacaaagatctcagtg
aagatgggttttgctcctggcaaggccatcggctctcatctgcgtgcacattatgagcgg
atcctttacccgtacaaccttttccagactggagccaatctgcccaaggcgactctgact
aatgacactaaagacaaagagtacacccctcacgacctgccgcagcgccagtctgtgcag
ccccaggagacctgcagcatcgctcgccgtgctaaacgaatgagatctgaaagaggaagc
ttcaaaatagaagctgaggaaatttgtgataatcgtcccaatctgagaaggagaatggga
acgtgtgccgtcaaacctgaaccagtgagaatggcagtcactgtggtgaaacaggagccc
actgaacacacagaaccaaccaattatgaagaatctaaaattaataatataaacaaacca
gcagggaataaagtggaccagtacatgtgtctggtatgcggcagtggaagtgcagaggac
cgcctgctcctgtgtgacggttgtgatgatagctatcacatcttctgtctgatcccgccc
ctccacgatgtccccaaaggtgactggaggtgtcccaagtgcttggctcaggaatgtggc
aaacctgctgttgcatttggctttgagcaggccagcaggagctacaccctccaagctttt
ggggacatggccgattccttcaagtctgattattttaacatgccagttcatatggttcct
actgagcttgtagagaaggagttctggcgtctcgtcagcaccatcgaggaggatgtcacc
gtggaatatggagcagacattgcctccaaggagtttgggagtggtttccctgtgaaaaac
agccattttgaagtgtctcccgatgacgagcattacctgaccagcggctggaacctgaac
aacatgccggtgctcgatgcctccgtgctgacccatattacagcagacatctgtgggatg
aaggttccctggctctatgtggggatgtgcttctcctctttctgctggcacattgaggac
cactggagctactccataaactatcttcactggggggagccaaagacttggtacggcgct
cccggttatgccgccgagcacctggaatcagtcatgaagaaattggctcctgagctgttt
gagtcccagccagatctccttcaccagctggtcaccatcatgaatcctaacacgctgatg
aacaacggcatcccgatctatcgcaccaaccagtgtgctggtgagttcgtcatcaccttc
cccagagcgtaccacagcggattcaaccagggtttcaactttgctgaggcagtcaacttc
tgcaccatggactggatgcctattgggcgtggctgtgtggatcactatcggcagctaagc
agatactgtgtcttctctcacgatgagatggtttgtaacatggccctcaaagcaaacacc
atggatgttgagctggcatcagccgtgcacgaagacatgaaagtcatggttcaagaggaa
aagaaactaagagaatgggccagcaaactgggtttggtgctgtctcgccgagttgattat
gaggagctcccagatgaggagcggcagtgtttcaagtgtcggaccacctgctacctgtct
ggtgtcacctgcgcctgcagctctgacaagatggtttgcctgtaccacgcccaaagcctc
tgcatttgtcctcttagtaatctaacactcaattacaaatttactatggatgagctgtac
cctctgatggagtcggtgaagctgcgttcagaatcctacaaagagtggctttcctctgtt
caggacatagtggagaacaaaggaaccaagaaaaaaggtttggaagaacttcacagtctg
gtggagcagggagaaacaaaggcgttccctaaaagcagcctcctggatcagctgcgttcc
atcacaaccgaggctgacaaagttgctgtgatggcgcaacagcttctcaatggaaaaagg
cagactagatatcgctcaggaggaggaaagtctcaaaaccacaatgaactgactgtagag
gagctgaggtccttcgtgcagcagctggacaacctgccatgtaacatccgacaggcaccc
ttacttaaggacctgttagcccgagtggacgacttccatcagtgcagcgagcgcctcctc
tccgatgagtcgcccagcccgcaggagctgcaggacctgctggacgtgagtctgggcttg
gacgtggagttgccacagttaccaatgttgagagagagactggagcaggcccgatggctg
gaggctgtgcagcaggccagcagcagacccgacagcctgtgcctggacaccatgaggagg
ctgatcgaccagggcgtgggtctggctcctcacagctccgtggaaaaagccatggctcgt
ctgcaggagctcctgacggtatcagagcagtgggaggagaaggtgctcagcctcatggag
gccaggccgtgccacagcatcgacacccttgaggctgccttacaagaagtcgaaaacatc
ccagcatatctgcccaactgtctgcagctgaaggacgtcgtcaccaaagccaagaagtgg
cttcatgaagcggaagcgctgcagctgggggggcgtattcctgtcctggagagcctctct
gagctggtcctcatagcagaaggcattccagtgagactggagcctcttagtcgactggag
gcgctcatcagtgacgttcagaactggaaggagagcgccgcgaagacattcctactgaaa
aacacacccttcactctccttgaggtcctctgcccaagatgtgacgtggggtcggggagt
cagaagttaaaatctaaaaaactgaaagagatttcccagcttgtaagaaaatcttcaaca
aaactggagtcggtttgtgagatcgagagagctctctcagaaagcaaagactctgcttct
gctatgaacactcttgctgaggtccaacagagggagatgggcatcctgctggctctgaga
gattcaaacgaagccaagtttctacctgctgaaaactgtagtgcacttaatgtttgtgtg
tgccaaaaggctcctctgggggacatggtgcagtgtgagctctgtcgagacctctttcac
tgcggctgcgtcgccatgcccgcagacctcgagtttggtcaagcctggctgtgcccgctt
tgcaagcggtcgaggaaacctcctctggacaaggtcttgcctttgttagcttcactgcag
aggattcgggttcgcctgccggaaggagacgccctgcgcttcctcattgagaggacggtg
cgatggcagcacagagtccagcaggcgtgcacagctggactgctgtccatttcgggaaac
acatggcccagaaaagctacatatctgtctcaggaaataaacggtggctctttttacata
gagcatccgtcgctcccacctcaggcactcagtccagatgtggaggagctgatgctggag
ggattcctgctgcaggtcactctccctgagaccgaacagttgtacagatacttgacatac
aagctcacaccgccgccctcacactgcagccccagtgggaggggtgcagagcagtctccg
aggaggagtcctcaacacaataagaacggagtttccagaaaagagtctctgagcagtcaa
agtaaaaggaccaagaggcgcaaagacagctccgactctcagcacagcgacaaagcgaag
aaatcccgcaagaagaagcccaaaaagagcaaagaacggagcgaggaagggaagagggtc
tgctcgccggggcacacatcgtctgaccccgccccttcagattcagaggaggacttttca
ctctgtgctgcaccatggtgcagagagccagagggggatgaggtgaactgggtccagtgt
gacggcagctgtaaccagtggttccatcaggtgtgtgtgggactctctgcagagcgggca
gagaaggaggactacatttgcataagctgcacacaacctgactatgaaagaggagactga

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