Oryzias melastigma (Indian medaka): 112144949
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Entry
112144949 CDS
T07439
Symbol
tead3b
Name
(RefSeq) transcriptional enhancer factor TEF-5 isoform X1
KO
K09448
transcriptional enhancer factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112144949 (tead3b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
112144949 (tead3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
112144949
NCBI-ProteinID:
XP_024125623
Ensembl:
ENSOMEG00000016048
UniProt:
A0A3B3CBI2
LinkDB
All DBs
Position
LG5:24173122..24205410
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AA seq
446 aa
AA seq
DB search
MDGDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHIQVLARKKVREYQAGIKVSSHLQVLARRKSREIQSKLKAMNLDQASKDKALQN
MAALSSAQIVSPSMIKNHLPPMSPAPYQPPRFWPGPISVQPGPSQEMVVDLNPGRTPGLS
RTSHVIKPFVQPPYQSLQGPVQPPIPAYEPLAPPPAPTATAVPVWQDRTIASSKLRMLEY
SAFMEVQRDPDNYSKHLFVHIGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKGP
QNAFFLVKFWADLNSSGMPDGPGSFYGVSSQYSSAENMTITVSTKVCSFGKQVVEKVETE
YARLEGGKCVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETL
LCIAFVFEVSNSEHGAQYHVYRLVKD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgcagagggggtttggagcccagatatcgagcagagcttccaggaggcc
ctcgccatctaccctccatgcggtaggaggaaaatcatcctgtccgacgagggaaagatg
tacggtcgcaatgaactgattgcaagatatattaagctgaggacgggcaaaacccgcaca
agaaagcaggtgtctagtcacatacaggtgttagcacggaagaaagtgcgtgaataccag
gcgggcataaaggtttctagccacttgcaggttctcgcccggagaaaatctcgcgagatc
cagtcaaagctaaaggcaatgaatttggatcaggcatccaaagacaaagctctacagaac
atggcagcgctgtcgtctgcacagatcgtctccccaagtatgataaagaatcatcttccg
ccaatgtctccagctccgtatcagccacccagattctggcctggtccaatctctgtgcag
cctggaccatctcaggagatggttgtagatctcaacccgggaaggactcctgggctcagc
cgcaccagccatgtcataaaaccttttgtacagcccccataccaaagccttcaaggcccc
gtacaaccacctataccagcttatgagcctttagcgccacccccagcaccaacagccact
gcggttccagtgtggcaggatcggacgattgcttcctccaagctgcggatgttggagtac
tcggccttcatggaggtccagagagatcccgacaactacagcaaacacttgtttgtccac
attggacagactaatccctcatacagtgatccactccttgaagctgtggacatccggcag
atttacgacaaattccctgagaagaaaggaggcctgaaagagctttatgagaaaggcccc
cagaatgctttcttcttagtaaaattctgggctgacctgaatagcagcgggatgccagat
ggacccgggtcattctacggtgtcagcagccagtacagcagcgccgagaacatgaccatc
actgtttcaaccaaggtctgctcctttggcaagcaggttgtcgagaaagttgagacagag
tacgcccggctggaaggaggaaagtgcgtttacaggatccaccgctcaccgatgtgcgag
tacatgatcaactttatccacaagctcaaacacctgcctgaaaaatacatgatgaacagt
gttctggaaaacttcacaattctacaggtggtgacaaatcgtgacactcaggagaccttg
ctttgtatagccttcgtgttcgaggtttccaatagtgagcacggagctcaatatcacgtc
tacagacttgttaaagactaa
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