Oryzias melastigma (Indian medaka): 112145068
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Entry
112145068 CDS
T07439
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112145068 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112145068 (lrrn1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_1
LRR_EndoS
V-set
Ig_2
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
LRR_6
Sp38
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
112145068
NCBI-ProteinID:
XP_024125838
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Position
LG1:complement(5927995..5932554)
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AA seq
714 aa
AA seq
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MALNFQLWSPRILLCVGVISFLPPANGKECPRLCVCEIRPWFTPQSTYKEATTVDCNDLR
LTRIPSNLSADTQVLLLQSNAISHTSGDLQALVNLTELDLSQNNFTNVEAVGLQNMNHLT
TLHLEENQISDLPDHCLGNLSSLQELYINHNKISSISPRAFAGLRNLLRLHLNSNKLHVM
DSRWFEETPNLEILMIGENPVIGLLDMNFQPLGSLRSLVLAGMDLTDVPANAFVGLDNLE
SISFYDNKLVRIPQLALQNVPNLKFLDLNKNPVHKIQEGDFRNMLHLKELGINNMMELVS
IDHYALDNLPELTKLEATNNPKLSYIHRLAFRDLPSLESLMLNNNALTAIYQKTVENLPN
LREISIHSNPLRCDCVIQWMTSNRTTVRFMEPLAMLCTSPPELKGKRVLELKMLESPEQC
LPLISHDSFPSHLDLELGMSVNLDCRAMAEPEPDIYWVTPLGSKITTDTVSDRYHLSSEG
TLRLSHVQVEDSGRYTCVAQNSEGADTWVATVRVNGTLLDSAQVMKIYVKQTESHSILVS
WKVNSNVMSSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSNIH
LQTHKSCVNVTTRSATFALDLSGQHPSAAVLVVMATMLAFLCLATVGMYTARKWKRKNYH
HSLKKYMLKTSSIPLNELYPPLINLWEADGEKDKDGGTEVKPCPVDTTRSYYMW
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaacttccagctttggtctcctcgaatccttttgtgcgtcggagttatttcc
tttctgcctccagcgaatggcaaggaatgtcctcgtttgtgtgtttgtgagatccgcccc
tggtttactcctcagtccacctacaaggaggccaccaccgtggactgcaatgacctgagg
ctgacccgcattccatccaacctatcagcggacacccaggtgttgctgctgcagagcaac
gccatctcccacaccagcggggatctgcaagctctggtgaacctgactgagctggacctt
tctcagaacaacttcaccaatgtggaagcagtcggccttcaaaacatgaatcatctgacc
accctgcacctggaggagaaccagatcagtgatctgcctgaccactgcctggggaacctc
tccagcctgcaggagctctacatcaaccacaacaagataagctccatctctccacgcgct
tttgccggcctgcgcaacctcctacgactgcacctaaattcaaacaagctccacgtaatg
gacagccgttggtttgaagaaacacctaaccttgagatcctcatgattggggaaaaccca
gttattggtcttctggacatgaacttccagcctctgggaagcctgagaagtttggttctg
gcaggtatggatctcaccgatgttcctgccaatgcctttgtgggtttagacaacctggag
agtatttctttctacgacaacaaactggtcagaatccctcaacttgctcttcaaaacgtt
cccaatctcaagttcttggatttaaacaaaaatcccgttcacaaaattcaggagggagac
tttagaaacatgctgcatcttaaagaactgggcatcaacaacatgatggagttagtgtcg
attgatcactacgctttggacaacttaccggaactcacaaaactggaggccaccaacaac
cccaaactgtcctacatacatagattggcctttagagacctgccgtctcttgaaagtctg
atgctcaacaataacgctctcacagctatttaccagaaaactgtggagaacttacccaac
ctgcgggagatcagcattcacagcaacccactgcggtgtgattgtgtcattcagtggatg
acttccaaccggaccacggtgcgcttcatggagcccttggccatgctgtgtacatcccca
ccagaactcaaaggaaagcgggttctggagctgaagatgttggagtccccagagcagtgt
ctgcccctcatctcccatgacagcttccccagccacttggacctcgagctgggtatgagt
gttaatctggactgtcgggcgatggcggaaccagaaccagacatctactgggtaactcct
ctggggtccaagatcaccacagacacagtgtcagaccggtatcacctgagcagcgagggg
acgctgcggctatctcacgttcaggtggaagattctggtcggtacacctgtgtcgcacag
aactcagaaggcgccgacacgtgggtcgccaccgttcgtgtgaatgggactctccttgac
agcgcccaagtgatgaaaatctatgtcaagcagacagagtctcactccatcctggtctct
tggaaggtcaattccaatgtcatgtcgtccaacctcaaatgggcctcagccaccatgaaa
atcgacaacccgcacatcacctacacggctcgtgttcctgtggacgtccacgagtacaac
ctcacgcacctgcagccggccaccgagtacgaggtctgcctcaccgtttccaacatacac
ctgcagacacacaagtcctgtgtcaatgtgacaacacggagcgccaccttcgccctggac
ctgtccggtcagcaccccagcgcggccgtgctggtcgtcatggctaccatgctggccttc
ctctgcctggccactgtgggcatgtacacagcccgcaagtggaaaaggaaaaactaccac
cactccctgaagaaatacatgctgaagacctcctcgatcccgcttaatgagctgtaccct
ccactcattaacctgtgggaggctgacggggagaaggataaagacggcggcacggaggtg
aagccttgtcctgttgataccacacgtagctactacatgtggtga
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