Oryzias melastigma (Indian medaka): 112145081
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Entry
112145081 CDS
T07439
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112145081 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112145081 (stag1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112145081 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
112145081
NCBI-ProteinID:
XP_024125883
Ensembl:
ENSOMEG00000016126
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All DBs
Position
LG22:complement(6274792..6318890)
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AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGAADGVGLSLNMSEMDEPEMKGKKKRGRPGKQPVTSNKKPRKSP
TDKVMAVPRGRGKANGVAQHNGDGGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKMVGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEMLSDRQESALIELTVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADAEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSMEELLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGVPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLVSGGREGLQPLVFNPDNTLQNELLNFVLDHV
FIDQDDESQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQEQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPEFPPVNLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKRRIEEESSVEGSWMMRNDTLQTPGALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDYVHNPQMQMSWLGQQKMEEVSRKDRANMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctccgagctccccgtcctacaggactcgtccaatgagtctggggctgcagac
ggcgtgggcctgagcctgaacatgagcgagatggacgagccggagatgaaaggaaagaaa
aagagagggaggcctggaaaacagccagtgacgtccaacaaaaagccgcgcaagtcgccg
acagacaaagtcatggcggtgccaagagggcggggcaaggcgaacggcgtggctcaacac
aacggggacggcggagaccccgtcactctgtttgaggtggtgaaactgggcaagagcgcc
atgcagtctgtggtggacgactggatcgagtcttacaaacaggaccgggatttggcgctg
ctggacctcatcaattttttcatccagtgctccggctgcaaaggcaccgtgaggattgaa
atgttcaggaacatgcaaaatgcagagatcattcgtaagatgactgaggagtttgatgag
gacagtggggattaccctctgaccatgccgggcccgatgtggaaaaagttccgctacaac
ttctgcgagttcatcagcgttctgatccggcagtgtcagtacagcatcatatacgacgag
tacatgatggacacggtgatctccctcctcaccggactctccgactcgcaagtgcgagcc
ttcagacacacctccaccctcgcagcgatgaagctgatgaccgccctggtgaacgtggcg
ctgaacctcagcatccatcaggacaacacgcagaggcagtacgaggccgagaggaacaag
atggtcgggaagcgggccaacgagaagctggagctgctgctgcagaagaggaaagagctt
caagagaaccaggatgaaatagagaacatgatgaactccatcttcaagggcatctttgtg
catcgctacagagatgcaatcgcggagatccgagccatctgcatcgaggagatcggcgtg
tggatgaagatgtacagcgacgccttcctcaacgacagttacctgaaatacgtcggctgg
acgttacacgatcggcaaggagaggttcgtctgaagtgtctgaaagctctgcagaacctc
tacacaaaccgagagctgtttccaaagctggagctgttcaccaaccgcttcaaggaccgt
attgtgtcgatgacgttggataaagagtacgacgtcgccgtggaggccatcaggctggtt
acactcatcctgcagggcagtgaagatgctctgtccaatgaagactgtgagaacgtctac
cacctggtttactccgcccaccggcctgtggccgtggcggccggggagtttctacacagg
aaattgttcagtcgccacgacccgcaggcagaagaagctctggccaaacgtcgagggagg
agcagtcccaacgggaatctcatccgcatgctggtgctcttcttcttggagagtgagctt
cacgaacacgcagcgtacctggtcgactcgttgtgggagagttctcaagagctgctgaaa
gactgggaatgcatgacggagcttctgctggaggagccggtgcaaggagaagagatgttg
tccgatcggcaggagagcgcgctgatagagctgacggtgtgcaccatccggcaggcagca
gaggcgcacccgcccgtcggcagaggcaccggcaaacgggtgctgacagcaaaagagagg
aagactcagatagacgataaaaacaaactgacggagcatttcatcatggctctgcccatg
ctgctatccaagtaccaggcagacgccgaaaaggtggccaacctgctgcagatcccgcag
ttcttcgacctggacgtgtacagcgccgggcgcatggagaagcacctggacgccttgttg
aagcagatccgcctggtggtggagaagcacatcgagacggacgtgctggaggcgtgcagt
aagacctacagcatcctgtgctccgaggagtacaccatcatgaaccgcgtggacatcgct
cgctcgcagctgatcgacgagatgaccgatcggttcgctcactccatggaggagctgctg
caggagggcgaagaggcagacgacgacgacatctacaacgtcttgtccactcttaaacga
ctcacagctttccacaacgcccacgatttgacccgatgggatctgtttggaaactgctac
agactgctgaaggcgggcatcgagcagggctccatgccggagcagatcgccgtgcaggcc
ctgcagtgctcccactactccatcctctggcagctggtcaagatcaccgagggggttccc
agcaaggacgacctggtggctctcaggagagttgtcaagtccttcctggcggtgtgtcag
cagtgtctgtccaacgtcaacactccagttaaagaacaggcgttcatgctgctctgtgac
ctgctgatgatcttcagtcatcagctggtgtcgggcggcagggagggcctgcagccgctg
gtgttcaacccggacaacactctgcagaacgagctgctgaactttgttctggaccacgtc
ttcatcgaccaggacgacgagagccagagcatggagggcgacgaagaggacgaggccaac
aagatcgaagctcttcataagaggaggaatctgctcgccgctttctgcaaactcatcatc
tacgacatcgtggacatgccggctgccgcagatatcttcaaacactatatgaagtattac
aacgattacggcgacatcattaaggaaactctgagtaaaaccagacagacggacaagatt
ctctgtgccaagactctcatcctgagtttgcagcagctcttcaatgagctgctccaggag
cagggacccaacctggaccggacgtcgtcgcacgtgagtggcattaaggagctggctcgc
cgtttcgccctcaccttcggtttggaccagatcaagaccagagaggccgtcgcaacgctg
cacaaggatggaatagaatttgcgtttaagtaccagaatcctcggggaccagagtttcct
cccgtcaacctggccttcctcgaggtcctcagcgaattctcctccaaactcatccgtcaa
gacaagaagacggtccactcgtacctggagaagttcatgtcggagtccatgtcggagcgc
cgggaggacgtgtggcttccgctcatctcctacaggaacagcttgctcacaggaggagac
gaggaccacatgtcggtcacgtcgggctccagcagcaagaccggctctgtgcgcagcaag
aagggacggccgccgctgcacaagaggcgcatcgaggaggagagcagcgtggaggggtcc
tggatgatgcgaaacgacaccctgcagactccgggggcgctccaaacccctcagctcacc
tcaacagtgctcagagagaacagacccgcggaacacatgccggacccggactcggagccg
ggatcggaaaacgactacgtgcacaaccctcagatgcagatgtcgtggctcggccagcag
aagatggaggaggtgagcaggaaggaccgagcgaacatgaactacatcaagtcccgcagc
aatcagggcgtccggcagaccgtgcgcgggctgatggaagacgacgcggagcccatcttt
gaggacgtgatgatgtcatcgcggggccagctggaggacatgaacgaggagtttgaggac
acgatggtcatcgacttgccgccatcgaggaacagacgcgaaagggcggagctaagaccg
gacttctttgactcggcggccatgattgaggatgagtcgggattcagcatgcccatgttc
taa
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