KEGG   Oryzias melastigma (Indian medaka): 112145088
Entry
112145088         CDS       T07439                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112145088 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112145088 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112145088 (ell2)
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112145088 (ell2)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112145088 (ell2)
    Little elongation complex (LEC)
     112145088 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 112145088
NCBI-ProteinID: XP_024125891
Ensembl: ENSOMEG00000002561
UniProt: A0A3B3B7W8
LinkDB
Position
LG5:complement(17150420..17172139)
AA seq 656 aa
MAALSEDGRYGLNCGQQSAERVTVLHVKLTETALKAIESYQNSASVPSLQPTIQFKGLQG
RIKIPRTDGSSGSVSNFDFYLSNVGKDNPQGSFECIHHYVSSSGASHLALLATIQDKVTV
CATNDSYQVTRERMTQAVEDTRERGTKVIKPGGQYRGKQVHTRKPALSAPDVVPERKRST
PINPANTIRKCLSNNPVSQKSLRDRIIHLLALKSYKKLEVLGRLQRDGINQKDRNSLGTT
LQQVANLNPKDNTYSLKDFIYRDVQRDWPGYSEEEKTQVDRILARKLGLPIESSSSSNLP
KDCVPASSQKRQGEFDFIDPLAPKKPRISHLTNRGSAASSSSERHEEEGSPSSKPPLLPP
SASSGPPSHLPISSHTLAPSHQQPSPASNSNSPSTPEGCGTQDLPTDQSSSYREPSPSPF
SASDALPDRYQNVVSRPASPSPPPCTSLTVTSTVITSPPLSNNSSKFKKKSKKHKDKDRE
KERKKRTERGSVSPPVVAEPVEESCRAKKKRSSVEVESEVHKDQDKEKPVQSTELSSKTD
TPDYAVKYTPLVSLDQRQNYKDDFNAEYDEYRQLHARVEGITRRFTQLGAQCRKLTPGSK
EYQNVQEEVVKEYKKMKQHNPSYQDEKQRCEYLHNKLAHIKRLIADFDQRRAQSWC
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggccgctctctccgaggatgggaggtacggattaaattgtggccaacagagcgccgag
agggtcaccgtcttacacgtcaaattgaccgaaacagcgctgaaggcgatagaaagctac
caaaattctgcgagtgtaccctctttgcagcctactattcaattcaagggactccaaggg
cgcattaaaattcccagaactgacggctcttcaggcagtgtcagcaattttgatttctac
ctgtctaatgtgggcaaagacaaccctcagggaagctttgagtgcattcatcactatgtg
tcgagctcaggggcctcacacctggcattgttggcaaccatacaggataaggtcacagtg
tgtgcaaccaatgactcctatcaggtgacccgggaacgaatgacccaggctgtggaggac
acacgtgagcgtgggaccaaagtcatcaagcctggtggccaatacagaggaaaacaagtt
catacccgcaagcctgccctatctgccccagatgtagttccagagcgcaaacgatccaca
cccatcaacccagccaacactatacgcaagtgtctttccaataaccctgtgtcgcaaaag
tcgctgcgggaccgcatcatccacctgctggcgctgaagtcctacaaaaagcttgaagtg
ctcgggcgtttgcagagagatggcatcaaccagaaggaccgaaattctctggggaccacg
ctacaacaagtggcaaacctaaatcccaaagacaacacatactctttaaaggactttata
tatcgtgatgtccagcgagactggcctggatactctgaagaggagaagacccaagtcgac
cgaatcctggctcgaaaattggggcttcctattgagtcgagctcatcaagtaatttgcct
aaagactgtgttcctgcatcttcccagaaacgtcagggtgaatttgacttcattgatccc
ttggctcccaaaaagcccagaatctctcatctcaccaatcgagggtcagcagcctcctct
tcctctgagcgccatgaagaagagggcagccccagctccaaaccccctttactacccccc
agcgcctcttccggcccgccatcccatctgcccatctcttctcacactcttgcaccctcc
caccagcagcccagccccgcctccaactccaactcaccaagcaccccagagggctgcggc
acccaggaccttcccacagaccagagctccagctacagagagccttcaccgagccctttc
tccgccagcgatgcccttccggaccgctaccagaacgtagtctctagaccagcctccccc
agccctcccccttgtacctctctcacagttacatccactgtcatcaccagccctcctttg
tccaacaattcaagtaagttcaaaaagaaatccaaaaagcacaaggacaaggaccgagag
aaggagaggaaaaaacgaactgaaagaggcagtgttagtcctcctgttgtagcagagccc
gtcgaggagagctgcagagccaaaaagaaacgcagctctgtggaagtggagagtgaagtt
cacaaagaccaagacaaagagaagccagtccaatccactgaactgtcatcaaaaacagat
actccggactatgcagtgaaatacacacctctggtttccctcgaccagcggcaaaactac
aaagatgacttcaacgcagagtatgatgagtaccgccagctgcacgctcgcgtggagggc
atcacgcgccgcttcacccagctgggggcgcagtgtcggaagctgacgccaggctccaaa
gaataccagaatgtccaagaagaagttgtgaaggagtacaaaaagatgaaacaacacaac
cccagctaccaggacgagaagcagcgctgcgagtatctgcacaacaaactggcccacata
aagcgcttgatagctgactttgaccaacgcagagcccagtcctggtgctga

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