Oryzias melastigma (Indian medaka): 112145112 Help Entry 112145112         CDS       T07439                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a   KO K14966   host cell factor 1 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03083   Polycomb repressive complex oml04980   Cobalamin transport and metabolism oml05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     112145112 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     112145112 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     112145112 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:oml01009]     112145112 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:oml03036]     112145112 (hcfc1a)    03029 Mitochondrial biogenesis [BR:oml03029]     112145112 (hcfc1a) Protein phosphatases and associated proteins [BR:oml01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      112145112 (hcfc1a) Chromosome and associated proteins [BR:oml03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      112145112 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      112145112 (hcfc1a)     MLL-HCF complex      112145112 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      112145112 (hcfc1a) Mitochondrial biogenesis [BR:oml03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     112145112 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  112145112 NCBI-ProteinID:  XP_024125926 LinkDB All DBs Position LG5:163888..174163 Genome browser AA seq 1789 aa AA seqDB search MSAPGSAASGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT LTWNKPGVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAATPAMSTAPTQ PVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSAAGASVVTVRPSQPGKSPVTVTSLPAG VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTAAASSPTTTRPIITVHKSGAVTVAQQAQ VVTTVVGGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG TVSTSLAGGTVDSSNASLVTPITTLGTISTLSSQVISPSAITVSAAQTSLTSTLPSSAIT VQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTDAAAGEGSGTVTLVCSNPP CETHETGTTNTATTSSAAIGGQVCSNPPCETHETGTTNTATTASSNMSSLRVCSNPPCET HETGTTNTATTATSKMEGVQKVCSNPPCETHVTGTTDTATQASSNMNAAGTSTVQSNSQK ACSNPPCETHVTGTTDTATQASSNMNAAGTSTVQSNSQNASSKPPCETQETGTTDTATTA TSNTEGVQQVCSNPPYETHVTGTTDTATQASSSMNAGETSTVQSNTQSACSNPPCETHET GTTNTPSTATSSMGEEQTNTAAGLVQRVCSNPPCETHETGTTNTATTATCGMETGEGTEA QQTVEGEEGTSSTEAASTTAAAGTTTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAT SSTEEPMQTDEAASAEAAPSEEAAAAMETQAEGETAATTTLNLPSELMSEGQGATLMVTG LSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDASADSQQPTSIPIML TQQELAALVQQQQQLQEAQAAAQQASVDASLPTEGLAPADSLNDPSVESNGHNEMAASVT SAVASLLPRTTAETLAPSSTFAPSASIASPAKLQAAAALAEVANGIEGEKQAPQPTPAKP VAKKENQWFDVGIVKVTNMVVTHFYVPADDSQGDDDSGIMPDYSQMKKMELQPGTAYKFR VAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSV YLAIQSSQTAEAKASSPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAAR NEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKTAGPKKARTDQ NT seq 5370 nt NT seq  +upstreamnt  +downstreamnt atgtctgcccctggttcagcggcgtctgggaccacggcgtcggtcctacaaccgcgatgg aaacgggtccttggctggtcgggtcccgtcccccggcctcgtcacggacacagagccgtt gctataaaggagcttatggttgttttcggcggtggaaacgaaggaattgtggatgagcta catgtatacaacaccgcaacaaaccagtggtttatcccagcggttcgtggtgatattccc cctggttgtgctgcatatggttttgtatgtgatggcacacggttgctggtatttggtggg atggtggagtatggaaagtacagcaatgacctttacgagttacaggccagcagatgggaa tggaaaaagttgaaagccaaaaatccaaagaacggtcctcctccttgtcctcgccttggt cacagcttttcactggttggaaacaaatgctatctgtttggtggactggccaatgatagt gaagatccaaaaaataacattcccagatacctgaatgatttgtacaccctcgagcttcgc ccaggatccagtgtcgttggatgggatattccaatcacatatggagttttgcctcctcct cgtgagagccacactgcagtggtatacacagaaaagactagtagaaaatctcgcttgata atctatggagggatgagtggctgtcgtcttggggatctgtggactcttgatattgatacc ctgacatggaacaaaccaggagttggtggcacagcccctcttccacggagtctccactct gccaccacaatcacaaacaagatgtatgtttttggagggtgggttcctttggtaatggat gacgtcaaagtggccacccacgagaaagagtggaaatgcaccaacactcttgcctgccta aacctcgactccatgtgttgggaaactgtgttgatggacacgcttgaagacaacatcccg agggcccgtgccggtcactgtgctgtggccattaactccagactttatgtgtggagcgga cgtgacggttaccgcaaagcgtggaacaaccaagtctgctgtaaagacctgtggtacctg gaaacagagcggccgcatgcccctgccagagtacagttagtccgtgccaacacgaactct ttggaggtgagctggggtgcagtctccacagcagacacgtacctgctgcaactgcagaag tacgatattcctgcaactccagcagcagccacaccagccatgagcacagccccaacacag ccggttaactctccaaagagccccgcaccagctgctgcagcaccgtctgctcaaagctta ccacagacagctgttttaaaagttgcagctcaacagtctgcagctggtgcatcagttgtc acagttcgccccagccagccagggaaatcccccgtcactgtgacatcacttcctgcaggc gttcgaatggtagtccctgcccaaaccacccaaggatcgcccattggaagcagccctcaa atgagcggcatggcagctttagccgcagctgctgctgccacacagaagatcccaccctct tctgcaggaaccgtcctcaatgttcctgcaggtgccaccatcctcaaaacggttgcagtt tctcctggcaccaccacagtgaaagttgcttccccagtgatggtgagcaacccggccact cggatgttgaagactgccgcagcccaagtggggacagcagctgcatcctctcccaccacc accagacccatcatcactgtgcacaagtctggtgccgtcacagtggctcagcaggcgcag gtggtaaccaccgtagtgggaggagtcaccaagaccatcactctggttaagagccccctc actatgggcggtagtggcactttgatctccaacctcggcaagatgatgtctgtggtacaa accaagccggtgcagacgtccgccgtcacaggccaggcttccaccaaccccctcacacag atcatacagacaaaggggcccctcccagctggcaccattctgaagctggtgacctctgca gatggcaagccgacaacaatcatcacgacctcacaggcaggaggcacaggaaacaagccc acaatcctcaacatcagcggcgtttctcctaccaccacaaagcagggcaccactatcatt aagaccatccccatgtccgccataatgacccaacctggagccacaggcgtgacaagcagt gctggcatgaaaacgccgataacaatcctgactacgaaggtaatgaccactggaactcct ggtaagatcatcactgcggtgcccaaactcgccactgcagctggccagcaaggactaaca caagtggtattgaagggagctcctggacagcctggcaccattttacgcaccgtccccatg agtacagtgggtggtgttcgactcgttactccagttaccgtgtctgcagtcaagcccact gtcaccactttggtggttaagggaactactggagtcaccactctggggacagtcactggc actgtgtccacaagcttagctggaggcacagttgacagttccaatgcctccctggtgacc cccatcaccacactgggaaccatctctactctgtccagccaggtcatcagcccctcggcc ataactgtgtcggccgcacagacaagtctgacttctacactgccctcatctgctatcaca gtgcagaaccagccaacacaggtgactctgataacaactcctagtggggtggaagcccag cctgttcaagatctacctgtatccatcctggcttcccccacctctgagcagccctcttcc actgatgctgcagctggagagggttccgggactgtcaccctggtctgctccaaccctcca tgtgagacccacgaaactgggacgaccaacacagccaccacgtcttctgctgcgattgga ggacaggtgtgttccaaccctccctgtgagacccatgagactggaaccaccaacaccgct acaactgcatcctcaaacatgtcttcgctgcgcgtgtgctccaacccgccatgcgagact cacgaaacgggcacgactaatacggcaaccacagcaacatccaaaatggaaggagtccag aaggtgtgctccaacccgccgtgcgagacccacgtgacgggcaccaccgatacagccacc caagcctcgtccaacatgaacgccgcggggaccagcacagtgcagagcaactcccagaaa gcctgctccaacccgccgtgcgagacccacgtgacgggcaccaccgatacagccacccaa gcctcatccaacatgaacgccgcggggaccagcacagtgcagagcaactcccagaacgcc tcctccaaacccccctgtgagacccaggagacgggcacgactgatacagccaccacggca acctcaaacacggaaggggtccagcaggtgtgctccaacccaccttacgagacacacgtg acgggcaccactgacacagccacccaggcttcgtccagcatgaacgctggggagaccagc accgtgcagagcaacacacagagcgcctgctccaacccgccctgtgagacccacgagacg gggacgaccaatactccgtccacagccacatccagcatgggagaagagcagaccaacaca gctgctgggctggtccagagggtctgctctaaccccccctgtgaaacacacgagaccggg accaccaacactgcaaccaccgcaacctgcggcatggagacaggcgagggcacagaagct cagcagacggtggagggagaagaaggtaccagcagcacagaggcagcttctaccacagca gcagctggcactaccaccacccagggcagagccattactactgtcactcagtccaccccc gcccctggaccttcagtaccctcaatttcttcaatcaccgagggagtgagtaccgctacc agctccactgaagaacccatgcagacagatgaagctgcgtcagcagaagctgccccatct gaggaggcagctgctgccatggagacacaagcagaaggagaaactgcagcaacaactacc ttgaacctgccttcagagctgatgtctgagggccagggagccacgctcatggtgacaggg ctgtcggatgaagaactggctgtgactgctgcagcagaggccgccgctcaggcagcagcc accgaagaagctcaggccctggccattcaggcggttctacaggcagctcagcaagctgtc atgaacgagggtgatgcttctgcagacagccagcaaccaaccagcatccccattatgctt acccaacaagagctggcagcgctggtccaacagcagcagcagctgcaagaagctcaggct gcagctcagcaagcctctgtggacgcaagcctgcccaccgaaggcctcgccccggccgac agcctcaatgacccctctgtggagagcaacggacacaacgagatggcagcatcagttacc agtgcagtggcttctctgctaccacgtactactgctgagactcttgctccatcaagcaca ttcgccccgtctgcatcaattgccagtccagcaaagctccaggcagcagccgctctggca gaggttgccaatgggatagagggagagaaacaagccccccagccaactccagcaaagccg gtcgcgaaaaaggagaaccagtggtttgatgtggggattgtaaaagtgacaaacatggtt gtcactcacttctatgtgccagcagatgattctcaaggagatgacgattctggtattatg ccagactacagccaaatgaaaaaaatggagctgcagcccggcacggcatacaagttccgt gtggctggaatcaacgcatgtggtcgcggagctttctctgagatttctgctttcaagaca tgcctaccaggctttccaggagcaccttgcgccatcaaaatcagcaagagtccagatgga gcccacttgacctgggagcccccctctgtcacgtcagggaagatcattgagtattcggtg tatctggccatccagagcagccagacagctgaggccaaggcctcctctccagcccagcta gccttcatgcgcgtgtattgtggacccaacccttcttgcttggtgcagtcgtccagcctg tccaacgctcacattgactacaccaccaagcctgccatcatcttccgcatcgccgcccgc aatgagaagggctacggtcctgccacccaagttcgatggctgcaggaatctggtaaagat gctgcttctgcgaaacctgcccccaaaagaccaggcacctctcctgataccaagactgct ggtccaaagaaagcaaggacagaccagtga

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