Oryzias melastigma (Indian medaka): 112145147
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Entry
112145147 CDS
T07439
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X9
KO
K06757
neurofascin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112145147 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112145147 (nfasca)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
L1 family
112145147 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_6
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
112145147
NCBI-ProteinID:
XP_024125983
Ensembl:
ENSOMEG00000001388
LinkDB
All DBs
Position
LG5:complement(14243091..14324819)
Genome browser
AA seq
1390 aa
AA seq
DB search
MLGRGVYVALTLVLFLLLWQEAGLIEVPLDSKIQQNMKQPPTIIKQSVKDYIVDPRDNII
IECEAKGNPIPTFSWKRNGKFFNIGSNPTVTMRKRSGTLEIGIRLGERPEDYEGEYQCFA
RNDHGMAMSNKILLRVSKAPLWPKEVLEPLLVTEGSSLVLPCNPPPGLPPPQIFWIDSNM
NPIPQNERVSMGQNGDLYFSNVLVQDAERDYSCNARFNFTQTIQQKNPFTLRVQTTEPYN
DTSFNATDPYGGRKVAESRPTFLTPSGIQSSKMVLRDKELLLECIAAGLPTPSITWFKKG
AELPARKVKFEKNNKVLRMLSVSEEDAGDYVCTANNNVGMIRHTISVEVKAAPYWLDKPT
NLILAPDEHGRLVCRANGKPKPTIQWFVDGEPLEAKISEGDQRRALLGDTIIFRSVEIGT
SAVYQCNASNQHGYLLANAFVSVLDMRPMMLGPKNQHIQVIENNHTFLDCPYFGSPIPDL
RWFKNGQGSGLDGGQYRVYVNGSLEIRRARREDEGTYTCVATNMLGAAENQVHLEVKEPT
RIVQAPVHQSAVRGTTARFDCKVNSDPTLPVTVTWTKDDKPLDLRWRLKKDKESLTIPNV
NEGDAGTYTCMAKSAIDQDSVSARLTVLEDDSLHPSLSSALPPGRPDPPMDLDLSDPAAR
SVRLTWIPGNDHKSPITGFLVQFEEDRWEPGRWQNLTSFSGDLNSVVLQLAPFVNYQFRV
IAVNSVGQSDPSRPSPRYKTSGAAPDAIPRGLRGWGTRKDNMEISWEPLQDLERNGLNLQ
YHVWWRRKDSGEQWNSGSTPLSSYVVHNTDTYVPYEIRIQASNEFGPGPESNVVIGYSGE
DKPTEAPRQLRVSKVNSTKAHVHWKAVNMSSIRGEFKEYRLYYSRESSLVPGLVVKEETK
NKGFYTTAEEPSGILTGLVPFSKYKMFMVVANNRFESPPSNTVEFTTREGVPDAPRFFKI
NRRTLDTLYLEWDRPLEPNGILVGYQLKYQAVNSSGSSRSKILTFQHNVTEFTLRLPDRS
ARYKLFLSALTQQGSGEVYAEESPHFSNEEGFTEEEGLVEVTNVFVYSALTPTPPLATLP
STTIAATESRIQATTPTTTTTTTTTTEAPPTTTAAVLLTSRGPDSNVLVTRGPEIWNLTV
DPNSVYANVSWRHSFPAGSSAFVLEFALDSEKTKRVVKSVPVMQQPPVTVADLNASTTYH
LRVYSHELTSISSTWVTFKTKAAYIDQVDIATKGWFIGLMCGIALIILILLIVCFIKRSR
GGKYPGAGWVAMVTKVLVRDKKDLPLDPVDHKDQDGSFDYQNGSSVHDRDKNQNSSDEDN
KPLQGSQTSLDGNVKESDDSLVDYGDGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEAT
SPVNAIYSLA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcggggtgtatatgtggccttgacgctcgtgttgttcctgctgctgtggcag
gaagcaggactcatcgaagttcctcttgactcaaagattcagcagaacatgaagcagccc
cccaccattattaaacaatcggtgaaggactacattgtggaccccagagataacatcatc
atcgagtgtgaggccaagggcaacccaatcccgacgttctcttggaaaagaaacgggaag
tttttcaacattggaagtaatccaacggtgaccatgcgaaagcgctctgggaccttagaa
attgggatccggctgggggaacgacctgaggactacgagggggagtaccagtgctttgcc
aggaacgaccatggaatggctatgtccaacaagatcctgctgcgggtctccaaggctcct
ctgtggcccaaagaagttctggagccacttttggtgactgagggttcctcactggtgctg
ccctgcaacccccctccaggcctgcctcctccccagattttttggatagacagcaatatg
aaccccatcccgcagaatgaaagggtgtccatgggtcagaatggagacctgtacttctcc
aatgttctcgtccaggatgcagaaagagactacagctgcaacgctcgcttcaacttcaca
caaaccatccagcagaagaaccccttcaccctcagagtccagaccacggagccttacaac
gacacatctttcaatgccactgacccgtacggtggccgaaaagtagctgagtcgcgaccc
accttcttgacgccttcagggatccagagctccaagatggttctcagagacaaagaactg
ctgttggaatgcatcgctgctggccttcccaccccctccatcacctggttcaaaaagggg
gcagagcttccagcacggaaggtaaagtttgaaaaaaacaacaaggtgcttcggatgctg
agcgtgtcggaggaggacgctggggactacgtgtgcaccgccaacaacaatgtgggcatg
atacgccacacgatctctgtggaggtcaaagcggctccgtactggctggacaaacccacc
aacttgattttagccccagatgagcatggccgtctggtgtgtcgagccaacggcaagccc
aagcccaccatccagtggttcgtcgatggggagcctttagaggcaaagatctctgaggga
gaccaacgcagggcgttgttgggggacaccatcatctttcgctcggtggagattggaacc
agtgccgtttaccagtgtaatgcctccaaccagcacggctatttgctggccaacgccttc
gtcagtgttctggacatgcgccccatgatgctgggtcccaaaaaccagcatattcaagtc
atcgagaacaaccacaccttcctggactgtccctacttcggctcccccatacccgattta
cgctggtttaagaacggacagggcagcgggctggacggtgggcagtaccgcgtttatgtc
aacggctccctggaaataagacgggcccggagagaggacgagggaacctacacctgcgta
gcaaccaacatgctcggcgccgcagagaaccaggtccatctagaggtcaaagaacccact
cgaatcgtgcaagcccctgtgcaccaatcagctgtcaggggaaccacggctcgttttgac
tgtaaagtgaattcggaccccaccctgcccgtcaccgtgacctggaccaaggatgacaag
cctctggatctgagatggaggctgaagaaggacaaggagtcgctgaccatccccaacgtt
aatgagggcgatgcaggaacctacacgtgtatggccaaatcggccatagatcaggactca
gtgtctgcccgcctcaccgtgttagaggatgactccctccacccctcactgtctagtgcc
ttgccgccaggtcgcccagacccccccatggacttggatttgtcagacccagcagcccgt
agcgttcgcctcacctggatcccaggaaatgaccacaagagtcctattacaggctttctg
gttcagtttgaggaggaccgctgggagcccggtcggtggcaaaacttaactagcttctcc
ggggacctcaactccgttgtcctgcagctcgcccctttcgtgaactaccagttcagggtc
attgccgttaactcagtaggtcagagcgacccgagtcggccctccccacgatataagacc
agcggggcagcccctgatgccattcctagaggtttgagaggatgggggaccagaaaggac
aacatggaaatatcctgggagcccctgcaggacctggagagaaatggtctaaacctccag
taccatgtgtggtggaggcgaaaggactctggagaacagtggaacagcgggtcgacgcca
ttgtccagctatgtcgtccacaacacagacacctatgtgccttatgagatccgaatccag
gccagcaatgagtttgggcctggaccagagtccaatgtggtcattgggtactctggagag
gataagcccacagaagcacctcgtcagctgcgagtgtcaaaggtgaacagcacaaaggct
catgtgcactggaaggccgtgaacatgagctccattcgtggggagttcaaggaatacaga
ctctactacagtcgtgagtccagtctggttcctggcctggtggtcaaggaggagaccaag
aacaaaggtttctacacaactgcagaggaaccgtctggaattctcactggtctggtgccc
ttttccaaatacaaaatgttcatggtggtcgccaacaaccgctttgagagtccaccaagc
aacacagtggagtttaccaccagggagggggttccagatgctcccaggttcttcaagatt
aaccgcagaactctggacaccctctacctggaatgggacagacctctggagcccaacggc
atcctagtaggataccagctgaagtaccaagcagtcaacagctccgggtcaagtcgctct
aagatcctgactttccagcataatgtgactgagttcacgcttcgacttccggaccgatcc
gcccgctacaagctgttcctgtcggcgctcacccagcaagggtcaggggaggtctacgca
gaggagtcgcctcacttctctaatgaagagggctttactgaggaagaaggcctagtcgag
gttaccaacgtcttcgtctactccgctctcactcctactcctcctcttgctactcttcct
tccactaccatcgctgctacagaaagtagaatccaagcaaccacccccacaacaactaca
actactaccaccaccactgaggcgccccccaccaccacagctgcagtgctgctcaccagc
aggggtcccgattcgaacgtgttggtgacccgcgggcctgagatctggaatctgacggtg
gaccctaacagtgtctacgctaacgtcagctggagacacagtttcccggccggcagcagc
gcatttgtgctagagtttgcactggacagcgagaagacaaagagggtagtgaagagcgta
ccagtgatgcagcagcccccagtaactgtagcggatctgaacgccagcaccacctaccat
ctgagggtttactcccatgagctcaccagcatcagcagcacctgggtcacctttaagacc
aaagcagcatacatcgaccaggtggacatcgccactaagggttggttcattggcctaatg
tgcggcatcgctcttatcattctcatcctcctcattgtctgcttcattaagaggagtcga
gggggaaagtacccaggtgctggctgggtggctatggtcacaaaggttctggtccgcgat
aaaaaagatctgcccttggatccagtggatcataaagaccaggacggatcttttgactac
caaaatgggtcgtccgtccatgacagggacaaaaaccagaacagcagcgacgaagacaac
aagcccttgcagggcagccagacatcgctggacggaaacgtgaaggaaagcgatgacagt
ctggtagactacggcgatgggggcgatggccagtttaacgaggacggctcctttattggt
cagtacacggtgaaaaaggacaaggacgagacggagggcaacgagagctcggaggccacc
tcccccgtcaacgccatttattccttggcgtag
DBGET
integrated database retrieval system
