Oryzias melastigma (Indian medaka): 112145252
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Entry
112145252 CDS
T07439
Symbol
skib
Name
(RefSeq) v-ski avian sarcoma viral oncogene homolog b
KO
K26503
Ski oncogene
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112145252 (skib)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
FlgE_D2
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
112145252
NCBI-ProteinID:
XP_024126148
Ensembl:
ENSOMEG00000022417
UniProt:
A0A3B3CRQ9
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Position
LG5:28724828..28768880
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AA seq
683 aa
AA seq
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MEGASFQPHPGLQQTLKQFHLSSMRSLGGPAAFSARWHQDSLFGKDGKSAEIVLSLPAQT
PPVMSGPLFIPSDRSTERCETVLEREPISCFVVGGEKRLCLPQILNSVLRDFSLQQINSV
CDDLHIYCSRCTADQLEILKVVGILPFSAPSCGLITQTDAERLCNALIYGGTYPPHCNKD
LGSLELERTERSFKVYHECFGRCKGLFVPELYSSPAAACIQCMDCRLMFPPHKFVVHSHK
RLENRTVHWGFDSSNWRVYVLLDPDYTDKEEKSHLEQLLKELKGKFDPSGKLTSKQCRSS
SPIPTKRRKFDKLQSPSADGDRKPHWLQSLSKSAQKDLKQVQLKQRPSAFRPWSPKVAEK
EKPAAQGEKSYSKNEGPAAAPVAALLHLKDSHAPVRGPAAKSIHNSDTQPSAKPSHSVST
DRADDIDTDGEIDVDDCDESPVPASSLSSPPSICNSASQSLSPQSGARAPDRPSWLPGSL
SPEMDAMRQMLYGGLETKEAREKVLQEIVRMRVKQEEKLAAALQAKRSLQQELEFVRVAK
KGRLRDAIEAKRNLRKEIERLRVEFERKMREAEDSCGRLKRELEKETKLRVCDKGCEAES
LQIKYSSQIEELHMELQQAEADREQLRQELQQEREARQNLECAVKTLQTQLALKAHSSPH
GDCKDTNTQTSKQSHPAQPRNGP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccagcttccagccccatcccggacttcagcaaactctgaagcagtttcac
ctcagctccatgcgctcgctcggcggccccgcggcgttctccgcgcggtggcaccaggac
tcgctcttcgggaaagatggcaaatcggcggagatcgtgctctcgctgccggctcagacc
ccgccggtgatgtccgggccacttttcatcccctccgaccgctccacggagcgctgcgag
acggtgctggagcgggagcccatctcctgcttcgtggtcggcggggagaagcggctgtgc
ctgccgcagatcctcaacagcgtgctgagggatttctccctccagcagatcaactccgtg
tgcgacgacctgcacatctactgctcccggtgcaccgcggaccagctggagatcctgaag
gtggtgggcatcctgccgttctccgcgccctcctgcgggctgatcacgcagacggacgcg
gagcgcctctgcaacgcgctgatctacggcggcacctacccgccccactgcaacaaggac
ctgggctccctggagctggagcgcacggagaggagcttcaaagtctaccacgagtgcttc
ggccgctgcaaaggcttgtttgtgccggaactgtacagcagcccggccgccgcctgcatc
cagtgcatggactgcagactcatgttccccccgcacaagtttgtggtccacagccacaag
aggctggagaaccggacagtccactgggggttcgactcctccaactggcgggtttatgtc
ctgttagacccggactacaccgacaaggaggagaaaagtcacctggagcaactgctcaaa
gagttgaaaggaaaatttgacccaagtgggaaactgaccagtaaacaatgcagatcttcc
agcccaatccccaccaagagacgcaagtttgacaaattacagtctccatcagctgacggc
gacaggaaaccccattggttacagtcactgtcgaagtctgcacagaaggatctgaagcag
gtccagctgaagcagaggccctctgctttccgtccctggtctcctaaagtggcagaaaaa
gagaaaccagctgctcagggcgagaagtcgtactcaaagaatgaggggcctgcagcggct
cctgtggcggcgctgctccatctcaaagacagccacgctcctgtcagggggcctgcagcg
aaatccatccataacagtgacacacaaccttcagcaaagccgagccattctgtcagcaca
gatcgagctgacgatatcgacacagatggagagatcgatgtggatgattgtgatgagagt
ccagtgccagcctcctccctatcctcacctccctccatctgcaacagcgcctctcagagt
ctgtctcctcaaagcggtgcccgagctccggacagaccctcctggctgccggggagtctt
tctccggagatggacgccatgaggcagatgctgtacggtggactggagaccaaagaggcc
cgggaaaaagtcctgcaggagatcgtcaggatgagggtgaagcaggaagagaagttggca
gctgctttgcaagctaagcgcagccttcagcaggagctggagtttgtgagagtagctaaa
aagggtcgtcttcgtgatgccattgaggccaagcgcaacctgcgtaaggagatcgagcgc
ctccgcgtggaatttgagcggaagatgagagaggcggaggattcgtgtgggcggctgaag
agagagctggagaaagagacaaagctgcgagtttgtgacaaaggctgtgaggccgagagt
ctccagatcaagtactccagtcagattgaggagctgcacatggagctgcagcaggcggag
gctgatcgcgagcagctgaggcaggagctgcagcaggagagagaagctcgccagaacctg
gagtgcgccgttaagaccctgcaaacccagctggcgctgaaggcccacagcagtccccac
ggcgactgcaaggacacaaacacacaaacaagcaaacaaagtcaccccgcacagccgagg
aatggaccctaa
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