Oryzias melastigma (Indian medaka): 112145301
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Entry
112145301 CDS
T07439
Name
(RefSeq) uncharacterized protein LOC112145301
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112145301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112145301
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112145301
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112145301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-C3HC4_4
FYVE_2
zf-RING_10
DZR_2
Motif
Other DBs
NCBI-GeneID:
112145301
NCBI-ProteinID:
XP_024126220
LinkDB
All DBs
Position
LG5:11927615..11936616
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AA seq
689 aa
AA seq
DB search
MWTNREAAKADQTKRKAHEAYHIPAFSLSNAELLNKAEKDEATITLVLKWSKQPEKQQKS
LEKSLQSWLNKNRNKELCCSVDKILKGKNALIRISPPPGLEIVLKLSGEILTLRDGSTVT
VESVILDSSKLNPQTADDGSTTSTASTTDILSNSWTSVQTSQRDKVYHRAATSSDFSKGT
KEKMWTNREAAKADHIPAFSLSNTELSDRTEKAEAPITLVLKWSNQPRKPRTYLEISLQS
WFNKREKSINCSVVRILEDKNALLKIEPVPVAEIVLKLSGEKLTLQDGTTVTVESVILNS
LKLRTQTTDDAFRTSTPSSSDDKTAKDEAPITLMLTWSNQHRNQQTYLEKSLQSWFSRRR
QGLRCDVIRILEDKNALIKIEPSPAVEILQKLCDEILTLGDDSTVTIESVVLGYLKPNPQ
TAHYASTTSTPSTSDVSGKRGSRNYLNPAAEISPVRGLLHLDQKSFTYYPNYSQLRGLPR
LRDWSGMHKSEKRSTTEGGATGGDSPEENCPICLSPFTDKESLSCKHEFCKLCLQQAEKS
SGPICPVCRKVFGIIQGDQPDGTMTWMKSSGPVPGFSHCGTITITYSIPSGRQTEKHPKP
GHFYTGTSRTAYLPDNKEGNEVLMLLKKAFDQKLIFTIGASRTTGCEDQVTWNDIHHKTN
LYGGPGSYGYPDPNYLSRVREQLKAKGIE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaacagagaagcagctaaagcagatcagacaaaaagaaaagcacatgaagca
tatcacattccagcattttctctgtctaacgctgaacttttgaataaagcagaaaaagat
gaagcaacaataactttggtgttgaagtggtccaaacaacctgaaaaacaacaaaaatct
ctagagaaatctctacaatcttggctcaacaaaaacagaaacaaagagttatgctgttca
gtagacaaaatccttaaaggcaagaatgctctgataaggatttcaccccctccaggtttg
gagattgttctgaaattatctggtgaaattctgactcttagagacggttcaacagtcact
gtagagtcagtcattctggactcatcaaagctgaaccctcagacagcagatgatggttcc
accacttctactgcatctacaactgatatattatcaaacagctggacttctgtccaaacc
agtcagagagacaaagtttatcacagagctgcaacatcttcagatttcagcaaaggaacc
aaagaaaaaatgtggacaaacagagaagcagctaaagcagatcacattccagcattttct
ctgtctaacactgaactctcggatagaacagaaaaagctgaagcaccgataactttggtg
ttaaagtggtccaatcaacctagaaaaccaagaacatatctggagatatctctacaatcg
tggttcaacaaaagagaaaaaagcataaactgttcagtggtcagaatccttgaagacaag
aatgctctgttgaagattgaacccgttccagttgcagagattgttctgaaattatctggt
gaaaaattgactcttcaagatggtacaacagtcactgtagagtcagtcattctaaactca
ctaaagctgaggactcagacaacagatgatgctttcaggacttctactccatcttcatca
gatgataaaacagcaaaagatgaagcaccaataactctgatgttaacgtggtccaatcaa
catagaaaccagcaaacatatctggagaaatctctacaatcttggttcagcagaagaaga
caaggattaagatgtgatgtaatcaggatacttgaagacaagaatgctctgatcaagatt
gaaccatctccagctgtggagattcttcagaaattatgtgatgaaattctgactctggga
gatgattcaacagtcaccatagagtcagttgttcttggctacctaaaaccaaatcctcag
acagcacattatgcttctaccacttctactccatctacatctgatgtttcaggaaagagg
ggaagccggaattatctaaatcctgcagcagaaatctctccagtccgaggtctacttcat
cttgaccagaaaagcttcacatattacccaaactactcgcagcttcgaggactccctcgt
ttaagggattggtcagggatgcataagtcagaaaagagatcaaccactgaaggaggagcc
acaggaggagacagcccagaggaaaactgtcccatctgtttgtctccatttactgataag
gaaagtctgagctgcaaacatgagttttgtaagttatgtctgcagcaagcagagaagagc
agtggacccatctgtcctgtctgcagaaaagtctttggtatcattcagggagatcagccg
gatggaaccatgacgtggatgaagagttctggtccagttcctggtttctcacactgtgga
accatcaccatcacctacagtattccaagtggaagacagacggaaaaacatcccaaacct
ggacacttctatactggtacaagtagaacagcatatcttccagacaacaaagagggtaat
gaagttctgatgctgttgaagaaagcctttgatcagaagctgatcttcaccatcggggct
tcaagaactactggctgtgaagaccaggtgacctggaatgacattcatcataaaacaaac
ttgtatggaggaccaggcagttatggatatcctgacccgaactacctgagcagagtgagg
gagcagctaaaggccaaaggcattgagtga
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