Oryzias melastigma (Indian medaka): 112145374
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Entry
112145374 CDS
T07439
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
oml04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112145374
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112145374
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112145374
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112145374
03036 Chromosome and associated proteins [BR:
oml03036
]
112145374
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112145374
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112145374
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112145374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
DUF4187
Motif
Other DBs
NCBI-GeneID:
112145374
NCBI-ProteinID:
XP_024126317
Ensembl:
ENSOMEG00000001029
LinkDB
All DBs
Position
LG22:complement(6138308..6222453)
Genome browser
AA seq
1361 aa
AA seq
DB search
MAAAYRVVVSSVSCYNSVVVDRRTHSHAVHYCCGPCGALSQGLDCAIAHRSTCSELLVAP
DPPYNDFNSSPVHSSNLITQQLPNHGKLCASMGAIHNGGLERAGSSGNLSLGEDSPTWRG
KKTPSGGGSTGNLSSSCSLKDITEEAINLASGKLKEFSFDKLRLSSSSHVTLRKGRKVRP
DSFSRRSTDLEIIYGHFSANSTTTTNISNNLGTSNDENTPPFVLGKGTGLEETKLNGNSA
TLSTVNKASGGSTSSLSSFGSLDQSLNTVASLYRTTLGEENLIARLLEKTRAEAASGGGE
DIRACLDILLKCSEDLKKCTDIIKQCIKRKAGGGPEEGGASPDSVYRAVMTRLSSYLKRL
PLELEGLGSLGGSGQGVQGAPGGGHSDLAELVNTLHSIQQGPYSPIFGNEQPPRYEDVVQ
SPPIPKSVAVSSTTKSIKSDSVQKAAVQSKDTPLTNGLQHTPNVSVPQNTLSPPPITYSP
CNSSPSHSPLRNSPIPPYTHTPPASPMEALFIEEEEAEMGKTSDNPLQQMHSPSRGLNNT
PSKNGTMLGQQLQPHTPYISSKPMAAISGYIPSWPSAATVPTNKASSQKNEDIDKLLMDL
ENLSQSMSHPRNTEPPLPVKTRKREGNKAISNDSFTQPKLAQFQIPNPTSQLSMNGLIPV
TSQSLTPPQGDISEPVTEEEDGALLLRILESIESFAQELVDSGAGGTGSVERKCGKEKEV
MRLLQDTLVPSSRADTPLESINTTAASTTPSIPTIEVSSMVTKEGETNAPAAIPVPVESE
GKWSATEEAIPVPEKAPQLLPAFTQGADRVAEDPTDEFHAAPSEAANVRLNTQVEEAPPA
VLPEVSVPDPIPTEEAIREIPVGEPGAASTLLIQQTPEVIRVQPKPEKKPVTPPPAPATA
APPPAPRSPSPPPAPAIITPPPPAINIPRFYYPRGLPAMGPAANHDSTIAAVETAFAELE
EEKADIYEMGKIAKACGCPLYWKAPMFCTAGGERTGFVSVHSFVATWKKVLLSCHDDASK
FIHLLAKPGCNYLEQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQRIYYVVNRS
WTGRITMMELRRSNFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYIDP
KDLGRYNDHASSHRIIERLFSGAVTRGSAVQREGRMSYAEFVWFLISEEDKKNPTSIEYW
FRCMDLDGDGVLSMFELEYFYEEQCERMERMGIEPLPFQDLLCQMLDLVKPESTGKISLG
DLKRCRMAHIFFDTFFNLEKYLDHEQRDPFAVQKDVDSEGPEPSDWDKYAAEEYEILVAE
ETANEQLHEGSFDDDYESEELQVSGDIRNKMEKLVISDLTA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctatcgtgtggttgtaagcagtgttagctgttacaacagcgtagtggtg
gaccgacggacgcactctcatgctgtgcattactgctgtgggccatgtggggcgctgtcc
cagggcctggactgtgccatcgcacaccgcagcacatgctcggagctcctcgtggccccc
gacccgccatacaatgacttcaacagctctcccgttcactccagtaacttgatcactcag
caactccctaaccacggtaaactttgtgcctctatgggggctattcataatggtgggctg
gagagagcaggcagcagtggcaatttgtctttaggggaggacagccccacatggcgaggt
aagaagacccccagtggtggtggatcaactgggaacttgagctcttcttgcagcctgaag
gacattactgaagaggccatcaacctggccagcgggaagctcaaagaattctcatttgac
aagctccgtctgtcctcatcaagtcatgtcactcttcgtaaaggtcgcaaagtccgcccc
gactcttttagccgtcgctccactgacctggagatcatctatggtcacttcagtgccaac
tccacaacaaccacaaacatttcaaataacttgggaacttctaacgacgagaacacgcct
ccgtttgtgttaggaaaaggaacgggattggaggagacgaaactaaacggcaactcagcc
acattgtcaacagtcaacaaagcaagcggtggatcaacgagcagtctttcaagttttggg
tcattggaccagagtctgaacacggtggcttctttgtatcgcaccacccttggggaagag
aaccttattgcccgtctgttggagaagacgcgggcagaggctgccagtggtggtggtgag
gacattcgcgcttgcctcgacatcctgctcaaatgttctgaagacctaaaaaaatgcact
gacatcatcaagcagtgcatcaagcgcaaagcaggtggtgggccggaggaaggtggagca
agtccagacagtgtttacagagctgtgatgacccgacttagctcctacctgaagagactg
cctctggagctggagggtcttggaagtttggggggcagtggacaaggcgtccaaggtgca
cctgggggtgggcacagtgatcttgctgagctggttaacactctccactccatccagcag
ggaccttactctcccatatttggcaatgagcagcccccacgctacgaagacgtggtgcag
tcaccacctatcccaaagagtgttgctgtttcctctacgactaagtctataaaatcagat
tcagtccagaaagcagcagtccagtcaaaggatactccactcaccaacgggctgcaacat
acacccaatgtctcggttcctcaaaacaccctctctccaccacctatcacatactcacca
tgtaattcctctccaagtcactcccctttacgaaactccccaatcccgccttacacccac
actcccccggcctcccccatggaagctctttttattgaggaagaggaagcggaaatggga
aaaacttcagacaatcccctgcagcagatgcactctccatctagagggctgaacaatacc
cccagcaaaaatgggactatgttgggacaacagctgcagccccacacaccttatatctca
tcaaaacctatggctgctatctctggctacatcccctcttggccttccgctgccacagtc
ccaacaaacaaagcctcctcccagaagaatgaggatatagacaagctactgatggactta
gaaaatctgtctcagagtatgagccaccccagaaacactgagcctccacttcctgttaaa
accaggaagagggaaggaaataaagcgatttctaatgactctttcactcaaccaaaactt
gcccagttccaaattccaaatccaaccagccaactatctatgaatggtcttattcctgtg
acctctcagagcctcactcctccccaaggagacatcagtgaacctgtgactgaggaagag
gacggagcacttttgctaagaatcctggagagcattgagagttttgcccaggagctggtg
gattctggagcggggggcaccgggagtgtagagaggaaatgtggaaaggagaaggaagta
atgagactcctacaggacactctggtcccatccagcagagctgatacccctctggaaagc
ataaacacaacagctgcttccaccaccccgtccattcctacaatcgaagtgtcatctatg
gtgacaaaagagggcgagacaaatgcacctgcagccattcctgtgcctgtagagtctgaa
ggaaagtggagtgctaccgaggaagccatacctgtacctgaaaaagcaccccaactacta
cctgcattcacacaaggtgcagatagagttgcagaagatcctacggatgagttccatgct
gccccatcagaagctgctaatgtgcgccttaacacccaagtggaggaggcaccacctgcc
gtcttacctgaagtctcagttcctgaccccataccaacagaagaagccataagagagatc
ccggttggcgaacctggagctgcctcaaccctcctcatccagcagactccagaggtaatc
agggtccagcctaagcctgaaaagaagcctgtcacgcctccaccagcacctgccacagct
gccccgcccccagcgccacgctcaccaagccctcctccagccccggcgattatcaccccc
cctcctcctgccataaacattcccaggttctactacccccgtgggctccctgccatgggc
cctgctgccaaccacgactccaccatcgctgccgtggagacggccttcgcggagctggag
gaggagaaggccgacatttatgaaatgggcaagattgcaaaggcttgtggctgtccgctg
tactggaaagcccccatgttctgcactgctggtggagagaggaccggctttgtgtcggtt
cactcattcgtggccacgtggaaaaaggtgttgctcagctgccacgatgacgcatccaag
ttcattcacctgttagccaaaccgggatgtaactacttggaacaggaagactttatccct
ctcctgcaggacatagtggacactcatcctggactcacatttctgaaagacgcccccgag
ttccactcacgctacatcacaacggtgatccagcggatctactacgtggtcaaccgctct
tggaccggccgcatcaccatgatggagctgcgccgcagcaacttccttcaaactctggcg
ctgctggaggaggaggaagacatcaaccagatcaccgactacttctcctatgaacacttc
tacgtcatctactgcaagttttgggagctggacaccgaccacgacttgtacatcgatccc
aaagacttgggcagatacaacgaccacgcctcctcacacaggattattgagaggctgttt
tcaggggcggttactcggggcagtgctgtgcaaagggaaggcaggatgagctacgccgag
ttcgtctggttcctcatatctgaagaagacaagaaaaatccaacgagcatcgagtattgg
ttccgctgcatggacctggatggtgacggcgtcctctccatgtttgagctggagtatttc
tacgaggagcagtgtgagaggatggagagaatgggaatcgaaccgctgcccttccaggat
ctgctctgccagatgctggatctggtgaaaccggaaagtacaggaaagataagcctgggc
gatctgaagcgctgtcggatggctcacatcttcttcgacaccttcttcaacctggagaag
tacctggaccacgaacagagagatccatttgctgtgcaaaaggacgttgacagtgaaggc
ccagaaccgtcggactgggataaatatgctgcagaggagtacgagatcctggtggctgag
gaaaccgcaaacgagcagctccatgagggatcttttgacgatgactatgaatccgaggag
cttcaagtctctggagacattcggaataaaatggaaaaactggtcatttcagacctgacg
gcataa
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integrated database retrieval system
