Oryzias melastigma (Indian medaka): 112145379
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Entry
112145379 CDS
T07439
Symbol
iqsec1b
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112145379 (iqsec1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112145379 (iqsec1b)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112145379 (iqsec1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IQ_SEC7_PH
Sec7
SOS1_NGEF_PH
Shugoshin_N
PH_19
bZIP_2
RHG20_PH
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
112145379
NCBI-ProteinID:
XP_024126322
Ensembl:
ENSOMEG00000023875
LinkDB
All DBs
Position
LG5:1721697..1853191
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AA seq
1230 aa
AA seq
DB search
MENPTENPSKAVEYLKELNKIIETQQGLLDKQRVRIEELELQVADLCQENACLKEQHQRH
LAACRLQHGALGAIKENIAPEKELTSSPAQASEIPLILTAPPRKRNYRKWKSASFGPDSE
ELGSAVAYRHHHQSVEGDGPGSEVGTSVDSSSCYGYVPVTHRGGLGPERLDNQLYGQILL
PGHPRPRRSKLQHSQSILRKQVEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRFI
TRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKFNSSYFE
GKQVSLTDGGTAVGALVQSDHDGERGQSKTSTTQSDFTDAITELEDAFSRQVKSLAESID
DALNCRSLHGEDSQPEQRRRNKDMDKQVEASQSSPDRCKLEEMTASYSDVTLYIDEEELS
PPLPLSLSVDRPSSTESDLPQRSLNSSQDYWSLVHKDDKGDTDTSCRSTPSLECQEQRLR
VEHLPLLTIEPPSDSSVELSDRSDRSSLKRHNAYERSNQQSSPKHVSHSLPPRGPSREEG
HRPRQLDPHVVVNGTPNRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSSRDSLREQT
LSKQTYHKETRNSWDSPAFSNDIIRKRHYRIGLNLFNKKPEKGTQYLIDRNFVPDTPVGV
AHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQG
EAQKVERLIEAFSQRYCICNPGVVQQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKL
DDFVKNLRGVDDGEDIPREILVGIYERIRKRELRTNEDHVSQVQKVEKLIVGKKPIGSLH
QGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVT
YSFRQSFSLYGMQVLLFENQYYPNGVRLTSAIPGADIKVLINFNAPNPQDRKRFTDDLRE
SIAEVQEMEKYRIESELEKQKGVVRPSMSQSSGLKKDTGNGTLSRASLDDSYAIGEGLKR
SALSSSLRDLSDAGKRGRRSSAGSLDSNLEGSIISSPHIRRRSPSSRDCPSRHSGHSLPS
SSSLLGSLFGTRRVKSPSPTPQLPHPALMAHSPHPLNLHHAARVETDSPAPMIPHNAPFC
HMGQNPPPYHHHHHYHPPAHLKHPPHQYHPPPPHNQQLPYPHSQHSHGGHSTHPPHPGHG
PHLHGPSPPPPPSQGSSNSKSKHSGISTVV
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccgacggagaacccgagcaaggctgtggagtatctgaaagagctgaacaag
atcatcgagacccagcaggggcttctggacaagcagagggtccggatcgaggagctggag
ctccaggtggcggatctgtgccaggaaaacgcatgtctgaaggagcagcatcagcggcac
ctggccgcctgcagactccagcatggcgcgctgggggccatcaaggagaacatcgcacca
gaaaaggaactcacctcatcacctgctcaagcctctgaaatccctctcatcctcaccgct
cctccacgcaaaaggaattatcgcaaatggaagtctgcttcttttgggccagactcagag
gagctcggctcagcagtggcttacaggcaccaccatcaatctgtggaaggcgatggccca
ggctctgaggttggcacctctgttgactccagcagctgctacggttacgtcccagtgacc
caccgaggtggacttggtcctgagcgcctcgataatcagctctacgggcagattctgctg
ccgggacaccctcgcccccgcaggtcaaagctacagcactcccagtccatcctccgaaag
caggtagaggaagaagccatcaagcgctcccgctcgctgtcagagagctatgagctttca
tctgaccttcaggacaaacaggtggagatgctagagcgtaaatatggtgggcgtttcata
actcggcatgctgcacgcaccatccagacggccttccgccagtatcagatgaacaagaac
tttgaacgtcttagaagctctatgtccgagaaccgcatgtccagacggattgttctatcc
aatatgagaatgcagttttcctttgaaggacctgagaaattcaacagctcctattttgag
gggaagcaggtctcactgacggatggaggcactgcagtcggagcacttgttcagtcggat
catgatggggaaaggggccagtcgaagacctcaactacacaaagcgacttcactgatgcc
attacagaactagaagatgccttctcccggcaggtgaagtctttagctgagtctattgac
gatgctctaaactgccgcagcttgcatggtgaggacagtcagccagagcaaaggagaaga
aacaaggatatggacaaacaggttgaggcttctcagagttcccctgacaggtgcaaactg
gaggagatgacggcatcttatagcgacgttaccctgtacattgatgaagaggaattatca
ccacccctgcctctttctctgtcagtagaccgaccctccagcacagaatctgacctgcct
cagcgctcccttaactcttcccaagattactggtccctcgttcacaaggatgacaaggga
gacactgataccagctgccgcagcacaccttccttagaatgccaagagcagcgtcttcgg
gtcgaacacctacccttgttgaccatcgagcctcccagcgacagttcggtggagttgagc
gatcgttctgatcgcagctctttgaagagacacaatgcgtacgagcgaagcaaccagcaa
agtagccccaaacacgtcagccacagcctaccacctcgaggaccttccagagaggaaggt
caccgaccccgacagctggaccctcacgtggtggtcaatggcaccccaaaccggcagagc
aagtctgagtcagatttctccgatggtgacaatgacagcatcaacagcacatcgaactcc
aacgacacgatcaactgcagctctgagtcttcatcgagggacagcctgagggagcagacg
ctcagcaagcagacgtaccacaaagaaacccgcaacagctgggactcccctgctttcagc
aacgacatcattcgcaagagacactaccgcatcggcctaaacctcttcaacaaaaaacca
gaaaagggcacccaatatctgatagaccgaaactttgttcccgacaccccggtgggggtg
gcccacttcctgctccagcggaaaggcttgagtaggcagatgattggcgagttcctggga
aacagacagaagcagtttaacagggatgttctcgactgtgtggtggatgaaatggacttt
tcggccatggagctggatgaagctctgcgcaagttccaggcgcacatcagggtgcaggga
gaagcccagaaggttgaacggctgatagaagccttcagccagagatactgcatctgtaac
cctggagtggtgcagcagttcaggaacccagacaccatcttcatcctggcctttgcaatc
atcctccttaacactgacatgtacagtcccaacgtcaagcctgagaggaagatgaagttg
gatgactttgttaaaaacctgcgaggcgttgatgatggggaggatattcctcgagaaata
ctagtggggatatacgagcgtattcgcaaaagggagcttaggactaatgaagatcatgtg
tcccaagttcagaaagtggagaaactgattgttggaaaaaagccgattggctctttgcac
caagggcttggctgtgtgctgtcgctgccccaccggagactggtctgttactgcagactg
tttgaagttcctgatcccaacaaaccccaaaagctgggtctacatcagagggagatcttc
ctctttaacgacctgctggtggttacaaagatctttcagaagaaaaagaactctgtgact
tacagctttcggcagtctttctcgctttatggcatgcaagtgctgctgtttgaaaatcag
tattatcccaacggagttcgcctgacctcagccattccaggggcggacatcaaagtcctc
atcaatttcaacgcaccaaaccctcaggatcgcaaaaggtttacagacgatctgcgagag
tcgatcgcagaagtccaagagatggagaagtaccggatagaatctgaactggaaaagcag
aagggcgtggtgaggccgagcatgtcccagagctcaggcttaaaaaaggacactgggaac
ggcaccctgagccgagccagcctcgatgacagctacgccattggagaaggcctgaagagg
agcgccctcagcagctcactgcgcgacctctcggatgcaggcaagcgtggaagacgcagc
agtgcaggatctctagacagcaatctggaaggctccatcattagcagtcctcacatccgg
cgccgatccccctccagccgagactgtccgtcccgacacagtggccactccctgcccagc
tcctcctccctgctgggctccttgtttggcaccaggcgggtgaagtcaccaagccccacc
ccccagctgccacatcctgccctcatggcccactccccccaccctctgaatctgcaccac
gcggcccgagtggagacggactcgccggcccccatgatcccgcacaacgccccgttctgc
cacatgggccagaaccccccaccttaccaccaccaccaccactaccacccgccggcccac
ctgaagcacccgccgcaccagtaccacccgccgcccccccacaaccagcagctaccttac
cctcactcgcagcacagccatggaggccactcgacacaccccccacatccaggtcacggc
ccccacctccacggcccctcacccccaccgcccccctctcaaggctccagcaacagcaag
tccaagcacagcggcatcagtacagtggtgtga
DBGET
integrated database retrieval system
