Oryzias melastigma (Indian medaka): 112145421
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Entry
112145421 CDS
T07439
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00603
Glycosphingolipid biosynthesis - globo and isoglobo series
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112145421
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112145421
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
112145421
Glycosyltransferases [BR:
oml01003
]
Glycan extension
FORS blood group (Forssman antigen)
112145421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
112145421
NCBI-ProteinID:
XP_024126403
Ensembl:
ENSOMEG00000002565
UniProt:
A0A3B3B8Y5
LinkDB
All DBs
Position
LG5:complement(17177909..17180880)
Genome browser
AA seq
344 aa
AA seq
DB search
MALCPFCKPPSGPVKIARVQILLGCFLLFLIIYFLNAYKISGTFKSLEKEKLRIVKDVTG
IKAAEPQTPLVTPWGAPLVWGDIHKSSWRRDKLMEKGIHIGLLVLVVGTYAQFVHRFLTS
AETYFLPDQIVTYYILTDNPRSLDPAIELGPERQIQVIPVAEVPGWDRLYHRRMALVADV
IRNKVRSEIEYIFCADVDQVFVGPVGEEILGDLVATLHPELFEMPRSSFPYEATEESSAF
VEENEGDYYYTSELCGGSVSEVYKLAQTCSLLILQDSANKVTARGLEESYLNRYLIDHRP
TRVLSPEYSWWDSALAAHVPHQRLISIGRQCEAYDMQKREQHKC
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtgtccattctgcaagccgccttcaggaccagtgaaaatagccagagttcaa
atccttctgggatgttttcttctttttcttatcatctacttcctcaatgcatataaaatt
tctggcacgtttaagtctttggaaaaggaaaaactaaggatagttaaagatgtgactgga
atcaaagccgcagaaccacaaactcctctagtgacaccatggggggcccccttagtgtgg
ggtgacatccataaatcctcctggagaagggacaaactcatggaaaaagggatccacatt
ggccttttggtgctggtggtgggaacctatgcccagtttgtgcaccgtttcctcacttca
gccgaaacctactttcttccagatcagattgtgacatattatattctcacggacaatccc
cgctccctggaccctgccatcgagctggggcccgagcgacagatacaggtgattccggtt
gctgaggtgcctgggtgggacaggttatatcatcgcaggatggctcttgtggccgacgtc
atcaggaacaaggttcgcagtgagatcgaatacatcttctgtgctgatgttgatcaagtg
tttgttggcccagtgggggaggaaatcctcggagacctggtggctacactacacccagaa
ctctttgagatgcctcgaagttcattcccctacgaggccactgaggaatcgtctgctttt
gtcgaggagaacgaaggggactactactacacatctgagctgtgcggtgggtcggtttcc
gaggtgtacaaactggctcagacctgctctttgctcattcttcaggacagtgcaaacaaa
gtaacagccagaggcctggaggaaagctacctgaaccgttatctgatcgaccacaggcca
acccgtgtgctgtccccagagtacagctggtgggactcggctctcgctgcccatgttcct
catcagagactaatatctatagggcgacagtgtgaggcttatgacatgcagaagagagag
caacacaaatgctaa
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