Oryzias melastigma (Indian medaka): 112145460
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Entry
112145460 CDS
T07439
Symbol
bbs7
Name
(RefSeq) Bardet-Biedl syndrome 7 protein isoform X1
KO
K16749
Bardet-Biedl syndrome 7 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112145460 (bbs7)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
BBSome
112145460 (bbs7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_3
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
112145460
NCBI-ProteinID:
XP_024126467
Ensembl:
ENSOMEG00000002989
LinkDB
All DBs
Position
LG2:21371167..21381131
Genome browser
AA seq
747 aa
AA seq
DB search
MSPSDRCSVRPSVHRGETEPGHKEEPESLWVFLRKMELHLNRVDYVQVGVTSQKSMRLLP
ALGKKATQKVAIADHDGILTCFGMKKGEAVPVFKTLPGQKISRMDLGGAPGTPQEKIFVC
SGSQVRGYTKKGKQFLTFEANLTESINAMYVSGADLFVCASYIYNHYCDCKDQDYFLSGD
KINDITCVSSEKLPHLTPVLACQDRVLRVLQGSTLAYDIEVPGPPSVLELYNKDAGEEVL
YGTTDGRLGLVQIGEHSAVAKWEIDNDKKKGGILCVDTFDIIGDGVNDVLVGRDDGTVQV
YGFDSANEPTLRFEHVLSESVTSIQGGCVGRESYDEIVTATYTGWVTGLTTESQKTEAGA
GEEFRMSKETQSKVEALRAELEQLQGKVLQGREQYQQTTQSSTAVSAVPVFNINDKFTLC
QDDASYSLLEVQTAIDNLLLQSDVPIDLLDVDKNSAVVSFSECDPEQPNGNFLLATYRCQ
ANTTRLELKVRSIEGQYGTLQAYITPRLQPKTCQVRQYQIKPLSLHQRTHSIDPTRPMNR
LSLVGQFSFAEIHSWVVFCLPEVPDKTPAEDSITFYFHNTFLGTQLEATYCKGTAHFHSD
NISTISILSDVLSKEATKKKINLNISYDINDDSVSHTLRMIHPKLEFQLLLAKKVQLVDA
LRELQVHEGNANFLIPEYRSILDESANLLEEYKKQPAHLERLYGMITDLFIDKFKFKGQN
VKTKVSSLLEILDNYDLNSLLEFFQDV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcccttcagaccgctgctcggtccgcccgtccgtccatcgaggtgaaacggaacca
ggtcacaaggaagaaccggagagtctgtgggtttttctgaggaagatggagctccacctc
aacagagtcgattatgttcaggttggggtgacatctcaaaaatctatgagacttcttcca
gctttggggaagaaagcaactcaaaaggtggccattgctgatcatgatggtatcctgaca
tgttttgggatgaagaagggagaggcagtgcctgtgttcaaaacactcccgggccagaag
atctccagaatggaccttggaggagctcctgggactcctcaggagaagatctttgtctgc
tcgggctctcaagtccgagggtacaccaagaaagggaaacagttcctcacctttgaagcc
aatctaactgaaagtatcaatgccatgtatgtctcaggcgctgaccttttcgtatgtgca
agttacatttacaaccactactgtgactgcaaggatcaggactacttcctgtctggagac
aaaatcaatgatatcacttgtgtgtcctctgagaagctccctcacctcactccagtcctg
gcttgccaagatcgagttctgagggtcttgcagggctccacacttgcctatgatattgaa
gtccctggtcctccatctgtgctggaactttacaataaagatgcaggagaggaagtcctt
tatggaacgacagatggaagactaggactggttcagatcggtgagcactctgctgtggcc
aagtgggaaattgataatgacaagaaaaaaggagggattctctgcgttgacacgtttgac
atcatcggagacggagtgaatgacgtcctggtgggcagagatgatggcacggtgcaggtt
tatggctttgacagtgccaacgagcccaccttacgatttgagcacgttttgtctgagagt
gtgacctccatccagggaggctgtgtggggagagagtcttatgatgagatcgtcactgca
acttatacaggatgggtgactggtctgaccacggaatcgcaaaaaactgaggctggtgct
ggagaggagttcaggatgagcaaagagacacagtctaaagtggaagcactgagagcggag
ctggagcagctgcaggggaaagtcctgcagggacgggagcagtaccagcagaccactcag
tccagcacagccgtctctgctgtccctgttttcaacatcaatgacaagttcactctctgc
caggacgatgccagctacagcctcctggaggtccagactgccattgataatctgctgctt
cagagtgatgttcccattgatctgctggatgtggacaagaactctgcagttgtcagtttc
agtgaatgtgacccagagcaacccaatggtaactttctcctggccacatacagatgtcag
gccaacactaccagactggagctgaaggtgagatctattgagggacagtatgggaccctg
caggcttacattacccccaggctgcaacccaagacctgtcaggtccgccagtaccagatc
aagccgctgtcccttcaccagaggacccacagcatcgacccgaccagacccatgaaccgt
ctcagcctggtggggcagttcagttttgcagagatccactcctgggtggttttctgcttg
cctgaggtgcctgataagacccccgctgaagacagcatcaccttctattttcacaatact
tttctgggcacacagcttgaagccacctactgcaaaggcacggcccacttccattccgac
aacatctccactatttctattctaagtgatgttctctctaaagaagcaaccaaaaagaag
atcaatctcaacatttcctacgatatcaatgatgactctgtgagccacacactcagaatg
attcatccaaagttggagttccagctgctgttggctaaaaaggtccagctggttgacgct
ctgagagagcttcaggttcatgaggggaacgccaattttctgattccagagtatcgaagc
atcttggatgaatctgccaatcttcttgaggaatacaagaagcaaccagcacatctggag
aggctttatggaatgatcaccgacctcttcattgacaaattcaagttcaaaggccagaat
gtgaaaacaaaggtgtcctctctgctggagattctggacaactatgatctaaattctctg
ttagaatttttccaagatgtttga
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