Oryzias melastigma (Indian medaka): 112145470
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Entry
112145470 CDS
T07439
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00510
N-Glycan biosynthesis
oml00513
Various types of N-glycan biosynthesis
oml01100
Metabolic pathways
oml04141
Protein processing in endoplasmic reticulum
Module
oml_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112145470 (rpn2)
00513 Various types of N-glycan biosynthesis
112145470 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112145470 (rpn2)
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GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
DUF5859
Motif
Other DBs
NCBI-GeneID:
112145470
NCBI-ProteinID:
XP_024126478
Ensembl:
ENSOMEG00000001134
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Position
LG5:3677578..3690301
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AA seq
631 aa
AA seq
DB search
MDPFRLLGLLFLGLALGGAQALTPSHYLSQSDVARLENLLSRPFSDLESAYYSVVGLSKL
EAVLPDHKEVCHFLKSQLNPTSVDSLFFAAETSRAISGCEIPVSNETRDILLAVVSEDSS
MAQIHRAVSALSSLGLPLASQEVVGALTARINKEDNVVAITLALQTASRLSQQAELEGIL
EEIEDLTARLDDLGGIYLQFEEGLEATALFVTAAYALSDHMDIEPPFKEDQVIQLVNSIF
SKKSWDSLAEAFSVASAAAALSNNRFHVPVLVNTQGPATVSHSQPTLQLLITDVLSRPLR
SANVLLESAHAVPSKSVVLSQEPFTLKNDVFELNFMAKQPPSGYYQFSVAVAGDSRLVAN
QVELKVKVSTEVAITNMDLSVVDKDQSIGTKTTRVDYPSKAKSSFTADSHQNFAMSFQLV
DVNTGVELIPHQTFVRLHNQKTGQEVVFVAEPDSKNQYKFELDTAERKSEFDSTSGTYSL
YLIVGDATLENPILWNVADVVLKFVDEEAPATVQSKTLYVPKPEIQHLFREPEKKPPTVV
SNTFTGLVLSPLLLLLILWLKLGANISNFSFSPSTILFHAGHAALLGLMYVYWTHLNMFQ
TLKYLAIVGGVTFLAGNRMLAQKAVKRMEKK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacccgttcagactcctcggcttgctcttcctcggcctggctctcggtggagctcag
gccctcacgccgtcgcactacctttcccagtctgacgtggcgcggctagagaacctcctg
agccgacccttcagcgacctggagtcggcgtactattctgttgttggtctcagtaaactg
gaagcagttcttcctgatcataaagaagtatgtcacttcctgaaatcccagctcaacccc
accagtgtcgactctctgttctttgccgctgaaaccagtcgagccatctcaggatgtgag
atccctgtttccaatgaaactcgtgacatcctcctggctgtggtcagcgaagactcgtcc
atggcgcagatccaccgggccgtgagcgccctcagttctctggggctcccccttgcgtca
caggaggtcgtaggcgccctgacagctcgcattaacaaggaggacaatgttgtggccatc
accttggctctccaaaccgcgtctcgcctttcccagcaggcagaacttgaaggaatttta
gaggaaattgaggatctcacagctcgcctggatgatcttggcggtatttatctccagttt
gaagaagggctggaggcgaccgccctgtttgtgacggcagcgtatgctctgtcagatcac
atggacattgaacctccctttaaggaggaccaggtcatccagttggttaactccatcttc
agcaagaaatcctgggactctctggctgaagccttcagtgtcgccagtgccgccgccgcc
ctgtccaacaaccgcttccacgttcccgtcctcgtgaacactcaaggtcccgccaccgtg
tcccacagccaaccgaccctgcagcttctcatcaccgacgttctgtctcgacctttgagg
tcagccaacgttctcctggaatccgcacacgccgttccctcaaagagtgtggtcttgagc
caggaacctttcactctgaagaatgacgtcttcgagctaaacttcatggcgaagcagccg
cccagtggctattaccagttctctgttgctgtggcgggagacagccgactggttgccaat
caggtggagctcaaggtgaaggtgtccactgaggtcgccatcaccaacatggacctctct
gtggtggacaaagatcagagcatcggcaccaagaccaccagggtggattatccctccaaa
gccaagagctccttcacagcagacagccaccagaactttgccatgtccttccagctggtg
gacgtcaacactggagtggagctcatcccacaccagacgttcgtccggctgcacaaccag
aaaaccggccaggaggtcgtgtttgtggccgagcccgacagcaagaaccagtacaagttt
gagctggacacggcggagcgcaagtccgagtttgactccacgtccggcacctactcgctc
tacctcatcgtcggggacgccaccctggagaaccccatcctgtggaacgtggctgatgtg
gtcctgaagtttgtggacgaggaagcgccggctacagttcagtcaaagaccctttacgtc
cccaaaccagagatccagcatctgttcagagagccggagaagaagcctccaaccgtggtc
tccaacaccttcaccggcctggttctgtctcctctgctgctgctcctcatcctgtggttg
aagctcggagcaaacatctccaacttcagcttctcccccagcaccatcctgtttcacgcc
ggacacgcagctctgcttggtctcatgtacgtctactggacccacctgaacatgtttcaa
accctcaagtacctggcaatcgtcggcggcgtaaccttccttgccgggaaccgcatgctg
gctcagaaagcagtgaagagaatggaaaagaaataa
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