Oryzias melastigma (Indian medaka): 112145550
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Entry
112145550 CDS
T07439
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112145550 (bhlhe40)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112145550 (bhlhe40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
112145550
NCBI-ProteinID:
XP_024126611
Ensembl:
ENSOMEG00000023321
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All DBs
Position
LG1:complement(5828799..5832058)
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AA seq
427 aa
AA seq
DB search
MERIPSVQPPPLSKLQTDLSDMQSMDFPMYVYKPRRGMKRGEESKDTYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKTLTSLLEQQQQKILALQSGM
QIEQPPVNQEKSEEMFRSGFHMCAKEILHYLAAHESSGDFTPSHVVNHLHKVAAEVLQGP
ARPRTPVSPGPSEVPAYHQHDLHKEKPDNLPPKPSEGYGKNCVPVIQRAYAPPSGEQSGS
DTDTDSGYGGELEKPESRVQHQEYYGPENPQKRSQADRQNSSIKQEDDEPRHKRPRVESS
EDELLSGGESSTSSSSSGYSSYMSVSPNHPPPPPHPLCMPFYLIPPSAAAYLPMLEKCWY
PGAVPMLYPGMGGSSPTMPSDRPSPPQLVLSPRGGSPAPTLSQTPMDSPALLQALKQVPP
LNLETKE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcattccaagcgtgcagccgcctcctctgtccaaactccagacggatctgtct
gacatgcagagcatggattttccaatgtacgtttataaaccgaggcgcggaatgaagaga
ggtgaagaaagtaaggacacctacaagctgccccacagactcatcgagaagaaaaggcgc
gaccgcataaacgaatgcatcgctcagctgaaagatttattacctgaacacctgaaactc
actactctgggccatctggagaaggctgtggttttagagctcacactcaagcatgtgaaa
accctcacctctcttctggagcagcagcagcagaagatccttgccctgcaaagcggcatg
cagatcgaacaacctcctgtcaaccaagagaagtcagaggagatgtttcgctctggcttt
cacatgtgtgccaaggagatccttcactatctagccgctcacgagtctagtggagatttt
acaccctcccatgtagtcaatcaccttcacaaagtggctgcagaggtgctgcagggtcca
gcccgaccccgcactcctgtcagccccgggccctcggaggtccctgcctaccatcagcac
gatctgcacaaggagaaacccgacaacctgccgccgaagcccagcgagggctacgggaag
aactgcgttccggtcatccagagggcatatgctccgccaagcggtgagcagagcggcagc
gacacagacacagacagtggctacgggggtgagctggagaaaccggaatccagggtgcag
catcaagagtactacggtccggagaacccgcagaagcggtctcaggcggatcggcagaac
tccagcatcaagcaggaggacgacgagccgcgccacaaacggccccgcgtcgagtcgtct
gaagacgagctgctgtcgggcggcgagtcctcgacctcctcgtcctcgagcggttacagt
agctacatgagtgtttcgcccaaccacccacctcccccgccgcaccccctctgcatgccg
ttctacctcattccgccctccgctgcagcctacctgcccatgctggagaaatgctggtac
cccggagccgtgcctatgctctacccaggcatggggggctcttcacccaccatgcccagc
gacagaccatccccacctcagctagtgttatcccccagggggggatctccagccccaacc
ctttcacagacccccatggattcccctgctctccttcaagcactaaagcaggtacccccc
ctcaacctggaaaccaaagaatga
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