Oryzias melastigma (Indian medaka): 112145565
Help
Entry
112145565 CDS
T07439
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112145565 (irf2bpl)
04121 Ubiquitin system [BR:
oml04121
]
112145565 (irf2bpl)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112145565 (irf2bpl)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Atypical E3
112145565 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112145565
NCBI-ProteinID:
XP_024126642
LinkDB
All DBs
Position
LG22:complement(2396208..2400028)
Genome browser
AA seq
565 aa
AA seq
DB search
MSSPQLPASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETTRHLKRA
QGFQDGRPPSAAKPPAKEPGGIPPADGAGKSLQPDRYSVSRFDYAGTRQANGYVGPNGYK
TDEGPPDLNRQSPNSRARSSGGPASSAGQTNVPPNLLPQTLLPHGLVGRVAPQSSAGRPA
SVSSTDQEREAKEKQRSAEALAELSESLRNRQEEWASRPKAVRDTLLALSACTPFDVRFK
KDHGLVGRVFAFDAAAKSGAEFELKIFIEYPSGSGAVFSSASGVAKQMYQDCMKDFGRGL
SSGFKYLEYEKKHGSGDWRLLGDLLPESLRFFKEAVGEEMLPQAHTDTSFPLLPHGRALS
SGRPGQRKRKTSPEPDSAEEPQRQQWISGQAEALKLSAAGSFSSGRSSPPEAPSPMAALV
SAADALGNPYSPNKDRDSVHSTSSRQNSSPVSPASLSGQRRLPEQPHPPNVPDSPAANSG
PLCCTICHERLEDTHFVQCPSVPGHKFCFPCSRESIKAQGASGEVYCPSGEKCPLLGSNV
PWAFMQGEIATILAGDVKVKKERDP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgcagctccccgcgtcccgcaggcagtcctgctacctgtgcgacctgccc
cgcatgccctgggccatgatctgggacttcaccgagcccgtgtgccgcggctgcgtcaac
tacgagggagcggaccgggtcgagttcgtcatcgagaccacccgccacctgaagcgggcg
cagggcttccaggacggccggccgccctccgcggcgaagcctcccgccaaggaaccgggc
gggatcccgccggcggacggagcggggaagtccctgcagccggaccggtactcggtcagt
cgcttcgactacgccggaaccaggcaggcgaatggatatgtcggaccgaacgggtacaag
acggacgagggtcctccggacctgaaccggcagagcccgaactcccgcgcgaggagcagc
ggtggtccggcgtcctcggcgggacagaccaacgtccccccgaacctgttgccgcagacg
ctgctcccgcacggtctggtcgggagagtagccccgcagagctccgcggggcggcccgcc
tcggtctccagcaccgaccaggagcgggaggcgaaggagaagcagcggagcgccgaggcg
ctggcggagctgagcgagagcctccggaaccggcaggaggagtgggcgagccggcccaag
gcggtgcgggacacgctgctggcgctgtccgcctgcacgccgttcgacgtccgcttcaag
aaggaccacggcctggtcggccgggtcttcgccttcgacgcggcggccaaaagcggcgcg
gagttcgagctgaagatcttcatcgagtacccgagcggctccggggccgtcttctccagc
gcctccggggtggccaagcagatgtaccaggactgcatgaaggacttcggccgcggcctt
tcctccgggttcaagtacctggagtacgagaagaagcacggctccggggactggcggctg
ctcggggatctgctgccggagtcgctgcggttcttcaaggaggcggtcggagaggagatg
ctcccgcaggcgcacaccgacaccagcttcccgctgctgcctcacggccgggcgctgagc
tccggcaggccgggccagaggaagaggaaaacctccccggagccggactccgcggaggag
ccgcagcggcagcagtggatctccggtcaggcggaggcgctgaagctctcggcggcgggc
tccttctcctccggccggagctcgcctccggaggctccgtccccgatggcggctctggtg
tcggcggcggacgcgctggggaacccgtactcccccaacaaggaccgggactccgtccac
tccacctcctccagacagaacagcagcccggtgtcccccgcctccctgagcggccagagg
cgcctcccggagcagccgcaccctcccaacgtgcccgactcccccgcggccaacagcggg
cccctgtgctgcaccatctgccacgaacgcttggaggacacgcacttcgtccagtgtccc
tccgtgcccggccacaagttctgcttcccctgctccagagagagcatcaaggcccagggc
gcctccggagaggtgtactgccccagcggggagaaatgccccctgctgggctccaacgtg
ccctgggccttcatgcagggagagatagccacgatcctggctggagacgtgaaggtaaag
aaggagagagacccctga
DBGET
integrated database retrieval system
