Oryzias melastigma (Indian medaka): 112145591
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Entry
112145591 CDS
T07439
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X2
KO
K19681
intraflagellar transport protein 52
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112145591 (ift52)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
112145591 (ift52)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
112145591
NCBI-ProteinID:
XP_024126691
Ensembl:
ENSOMEG00000001125
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All DBs
Position
LG5:3658866..3666972
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AA seq
432 aa
AA seq
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MEKDQNCIVFNASKRELFTNNNGYKSVQKRLRAQWKILSIKDELSEEKLKGVKLWVSAGP
REKFTASELEVLKHYLDGGGNMLVMLGEGGEMKYDTNINFLLEEFGVFVNNDAVVRNTYY
KYFHPKEALVSNGVLNREISRAAGKVVTGVLEEENVGNNSQALTFVYPYGATLSVIKPAV
AVLSTGSVCFPLHRPVLAFYHGKEAGKLAVSGSCHMFSDQYIDKEENSKILDVLLQWLMS
DNIHLNQIDAEDPEISDYTMLPDTALLSEQLRVCLQEGDEIPRDFTSLFDMSLFSLSTDT
LPQVLNTYKQLNVKNEPLQLIAPQFETPLPQLQPAVFPPAFSDLPPPMLDLFDLDEAFSS
EKVRLAQLTNKCTDNDLEFYIRKCGEILGITSKLGKQMDAKHIMEHVFFQVVDFKKLNQE
HDGDTEPRLTPL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagatcaaaactgtatagtatttaatgcgtccaaacgggagctgttcacaaat
aacaatggatacaagtcggtgcagaagcggctacgagctcagtggaaaatcctaagcata
aaggacgaactctctgaggagaagctgaaaggagtcaagctgtgggtttctgcaggtccc
agggagaagttcacagcatctgagcttgaggtgctgaagcattacctggatggaggagga
aacatgctggtcatgctgggcgaaggaggagaaatgaagtacgataccaacataaacttt
ctcctggaggagtttggagtattcgtcaataatgacgctgtggtgaggaatacgtactac
aaatacttccacccaaaagaggcgctcgtgtccaacggtgtgctgaacagagaaatcagt
cgtgcggctggaaaagtggtcacaggagtcctcgaagaggaaaatgttggaaacaattca
caggctctgacgtttgtgtacccgtatggagccactctgagcgtgatcaaacccgccgtc
gctgttctgtcgacgggctccgtctgcttcccgctccacaggcccgtcctggccttctat
catggaaaggaggcgggtaaactggccgtctccggctcctgtcacatgttcagtgatcag
tacattgacaaagaggagaacagtaagatcctggacgtcctccttcagtggctcatgagt
gacaacattcacctgaatcagatcgacgctgaagatccggagatctccgattacaccatg
ctgcccgacaccgccctgctgtctgaacagctccgggtctgcttgcaggagggggacgag
attccccgagacttcacgtccctgttcgacatgtctctgttcagtctgtccacagacact
ttgcctcaagtcctaaacacctataagcagctgaacgtcaaaaacgagccgcttcagctg
atcgcaccccagtttgaaacgcccctgccccagctccagcccgctgttttcccgcctgcc
ttcagcgaccttcctccccccatgctggatctgtttgatctggatgaagcgttttcgtct
gagaaagtgcgcctggcgcagctcaccaataaatgtaccgacaatgatctggagttttac
attagaaagtgtggagaaattcttggcatcacatcaaaactggggaaacagatggatgcc
aaacacatcatggagcatgtgtttttccaagtggtcgatttcaaaaaactcaaccaggag
catgatggagacacagagccccgcctgactcccctttaa
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