Oryzias melastigma (Indian medaka): 112145601
Help
Entry
112145601 CDS
T07439
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112145601
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112145601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
EGF_2
EGF_TEN
DUF7630
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
112145601
NCBI-ProteinID:
XP_024126714
Ensembl:
ENSOMEG00000020182
UniProt:
A0A3B3DWS2
LinkDB
All DBs
Position
LG22:14522783..14606347
Genome browser
AA seq
1979 aa
AA seq
DB search
MDRAGFAVFMVVAVALVRIGGGHKETTGEREEGAEAGRQSPEISQGHPFASGGHAPGSES
PLRAPRAASPQDEHRSKTPRDALDSAPRDGTLRTARHPQSQQQRVNRRQSSKPSSASRRL
AGPNVCGGHQCCSGWAVAPGTNRCIKPDCQPPCQNRGSCSRPHTCVCRSGFQGPRCEEVA
PEQVYIRERGTLRRVEPGSNPFQRDRPQRRPSERDGTDTTKAQTPRPLTSKLSVHSGSQM
KRDPQDSSPQHSGTSRTVKRYPSSSGPITSNALPSSNGHAHSVDHSWYNHRNGHSNTPSG
PSSGSHRQTNNRQLQGQFNNVLLPAGANLTSNLDRIKIVFTPMMCNRVCNGGRCYNNCEK
GDITTVYSETSQQQQQQPKSQGFRLFFCQIPCLNGGRCIGRDLCWCPSNSTGKFCHLAAP
PPARPSPHSRTLTARHGAKPPSHSMYTLPLSNQQVSLHPSLVNVHIQHPPEAEVQIHQVA
RVQPGQRLANTEGVHSVQQRSQPGNGRQHPSEHGSRQSHSTGHENSHATAHSRQNEVVGR
CFQETADGQCGKPLPGLTKQDDCCGSIGASWGLNKCQECPTKPAYAVIANGQVQCPKGFK
RMNATHCQDINECLLPGICKNAECVNAKGSYRCTCKPGYMLDAARSHCVSDKAVSEERAS
CYRSVASGLCSLPLANHLTKQICCCSRVGKAWGPSCDRCPLPGSDHFKEICPAGHGYTYS
RSDVQISVRQLEDDELQSTGVSLEEHYPQFPSSQPSLPFPSGPQNPSYPQTPQVPQYPDY
HDTPRIPQHPLSPQHPSYSENEAAEHAEGSEFLLSPAVVTDSPLKQPGINKCASIPSICG
RGKCILVQTGYTCLCEPGFKLSALQTNCIDVNECDENPCEGKGRCINSYGSYSCQCHSGY
SQVITQNRKFCQDINECSMPNKCQNGKCVNTEGSYTCECNSGFAKSWRDQCEDVDECKDP
SSCPSGICINTLGSFQCQACSPGFRLINERCVDVNECLNQTVCGRGRCVNTQGSYRCNCF
HGYKLSSDNVCRDVNECVLPEVCNHGHCVNLEGTHECTCNHGYQVTPDRKSCEDVNECGT
GNACPVGICINTAGSYTCQNCRPGFGPSADGLRCEDIDECARGDMCLGGVCANTEGSFIC
SRCRAGYRVSLDQQSCEDIDECQSLSTCANGICLNSEGSYSCENCPAGYRVSHDGEFCKD
IDECALPTTCPQGTCTNTEGSFTCVTCQPGFRVSDDGQQCDDVNECLGSSVCPGQMCLNT
QGSYTCQSCQTGFQLSEDGHTCQDINECQTPGVCPSGVCTNTEGSFSCTACAQGFTVTPN
GLSCEDVDECQDTSLCLGGRCTNSIGSFSCSCPSGLELVDEKFCRDVDECNNDDTCVRGQ
CINTDGSFLCLCEAGFKFSVDTSDCEDQDECKEFGSSVCGTWRCENTIGSYKCFMKHQSS
SLEEDYDINECNNETICGEHGFCENTDGSFRCQCDRGYTNPAGDVTQCVDVNECEMSSAL
CGDAMCENYDGSFLCICPNDNEEFDPITSRCRSMAMFDTKPVYPFTPSSDERKECYYNLN
DANYCNNVLSRNTTKQECCCTAGAGWGDNCEIHACPLPGKDDYNQLCPHGSGFLPLPDSL
KQSHGNRLPYIDANECEMFGSEICKNGQCSNIFATYTCFCRSGFYYDNIRLECVDYDECQ
FENTCENGACVNTAGSFNCFCSPPLVLDSSLHRCVSPNSTEETFEYGQDVHEDICWRRLE
EVNMCADPLPERRTTYTECCCLHGIAWSDQCAFCPRKDSADYATMCNLPWEGGSDSLRDQ
IGFEYGPEGPEDPSVPFLPPYWDNYGGPGGTYDIPESVPLFHDHDYNVQQPPVRVPVVRP
GSHPQPVNPHSEHHNAFEGLQAEECGILNGCENGRCVRVQEGYTCDCFDGYELDLSKMAC
VDINECEDISDKVPLCHNGQCTNTEGSYKCTCLAGFVASAKPHTCIPTIPDPKLRDSEK
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgcaggatttgctgtcttcatggttgtcgctgttgcgctcgtgcgcattggc
ggcggtcacaaggagacgacaggtgagagggaagagggcgccgaagcggggcggcagtcc
ccggagatcagtcaaggtcacccgttcgcatccggcggacacgcaccggggtccgagagt
ccgctccgcgcccccagagctgcatcacctcaggatgaacacagatccaaaactccccgg
gacgcgctcgactctgcgcccagagacggcacgctgcgcaccgccagacacccgcagagc
cagcagcagagagtgaaccgcaggcagagcagcaagcccagctctgccagcaggcgactc
gcagggcctaacgtttgtggcggacaccagtgctgctctggctgggcagtggctccagga
accaaccgctgcataaaacctgactgccagcccccctgccagaaccgtggctcgtgcagc
cggccacatacatgtgtgtgtcgctcaggctttcagggcccccgctgtgaagaggtggcc
ccagagcaggtgtacattcgagaacgaggcaccctgaggcgcgttgaacctggaagcaac
ccattccagagagaccgaccgcagagacggccgtcagagagggatggcacagataccacc
aaggcgcagactccacgacctctgacctccaaactgtctgtccactctgggagccaaatg
aagcgggaccctcaagactcctcgccccaacactcagggacctcccgtaccgtcaagcgt
tatccatcatcctctgggcctataacctccaatgctctaccaagtagtaacggccacgct
cacagtgttgatcacagctggtacaatcataggaatggacacagcaacactccatctgga
ccctcttctggctctcacaggcagaccaacaaccgacaactacaaggacagttcaacaac
gtgttgctgccagcaggtgccaacctcacctcgaacctggaccgcatcaagatcgtcttc
acacccatgatgtgcaacagggtgtgcaatggcggacgctgctacaacaactgtgagaag
ggagacattaccactgtgtacagtgaaacttcgcagcagcagcagcaacagccaaagagc
cagggcttcagactcttcttctgtcagatcccctgtctgaatggagggcgatgcatcggg
agagacttgtgttggtgtccgtcaaattcaacagggaagttttgtcaccttgcagctccg
cctcctgccagaccctctcctcacagccgcacactcaccgcccgccacggagccaagcca
ccatcccactccatgtacacccttccactatctaatcagcaagtgtctctgcacccatcc
ttggtgaacgttcacattcagcacccgcccgaggccgaggtccagatccatcaagtcgct
cgagtccagccggggcagaggctggccaacacagagggagtccattctgtccagcagcgc
tcacagccgggaaatgggcgccaacaccccagtgaacacggcagcagacagtctcactcc
actgggcatgaaaacagccacgctacagcacacagccggcagaatgaagtagttgggaga
tgctttcaggagacggctgatggacagtgtggcaagcctctgccaggcctgaccaaacag
gatgattgctgtggaagtattggtgcctcgtggggtttaaataagtgccaagaatgtcca
accaaaccagcgtatgcagtaattgcaaacggacaagttcagtgtcctaaaggtttcaaa
aggatgaatgccacacactgtcaagacatcaatgagtgcctgctgcctggaatttgtaaa
aatgctgaatgtgtcaacgccaaaggaagctaccggtgcacgtgtaaacccggttacatg
ttagatgctgcaaggagccattgtgtctcggacaaggctgtctccgaagagagggcgtcc
tgctacaggtcggtcgcctcaggtttatgctctctgccactggccaaccatctcaccaag
cagatctgctgctgcagccgtgtgggcaaggcctggggtcccagctgcgatcgttgtccc
ttgccgggttcagaccacttcaaggagatctgcccagccggacatggatacacatactca
cgctcagatgtgcagatatccgtccggcagctggaggatgatgagctgcagagcacagga
gtgtctcttgaggagcactatcctcagtttccatcgtcccagccctcgctgccctttccc
agtgggccgcagaaccccagttaccctcagacaccgcaagtgccccagtaccctgattac
cacgacacgccacgaataccccagcaccctttgagcccgcaacatccgtcatattcagag
aatgaagcagctgaacacgcagagggtagcgaattcctcctttcgccagctgttgtgact
gactctccattgaagcagccaggtattaacaagtgcgcttcaataccctctatatgcggc
cgtggaaaatgcattttggtacagactggctacacttgtctgtgtgaacctggatttaag
ctcagtgccttgcagaccaattgcatcgatgtaaatgagtgtgatgaaaacccatgtgaa
gggaagggtcgctgcataaacagctatggctcctactcatgccagtgccacagtggttac
agccaggtgatcacacagaacaggaagttctgtcaagacattaatgagtgcagcatgccc
aacaaatgccagaatgggaaatgcgtcaacacggaaggatcttacacctgtgaatgcaac
agtggttttgccaaatcgtggagagaccaatgtgaagatgtagatgagtgcaaggatccc
agctcgtgtcccagcgggatctgcatcaacacactgggctccttccagtgccaggcctgc
agccccgggtttagactcatcaatgaaagatgtgtggatgtaaacgaatgcttgaaccag
acagtgtgcggtcggggtaggtgtgtcaatacacagggctcctatcggtgcaattgtttt
catggctacaaactctcttcggacaacgtttgccgagatgtgaacgaatgtgtcctgccg
gaagtttgcaaccacggccactgtgtcaatctggaaggcacccatgaatgcacctgtaac
catggttaccaagttactccagacagaaaatcctgtgaagatgtcaacgagtgcggaact
ggtaatgcctgccctgtgggaatttgcatcaacactgcaggttcctacacttgccagaac
tgcagacccggatttggaccatctgctgacggacttagatgtgaagatattgatgaatgt
gcccggggtgacatgtgtctgggcggggtgtgtgccaacacagaaggatccttcatttgc
tccagatgtagggctggctacagagtgtctttggaccagcagagctgtgaagatatcgat
gagtgccagtccctctctacatgcgccaatggaatctgcctaaactctgagggctcgtac
tcctgtgagaactgccccgctgggtacagggtttcgcatgacggggaattctgcaaagat
attgatgaatgtgcgcttcccacaacatgcccccaggggacttgtacgaacacagagggt
tcgttcacgtgtgtcacctgtcagcctggtttcagggtctctgatgatgggcagcagtgt
gatgatgtgaatgagtgcctgggctctagtgtgtgcccgggtcagatgtgcttgaacacc
caaggatcttacacctgccagagctgtcaaactggctttcagctgtctgaagatggacac
acttgtcaagacataaacgaatgccaaactccgggcgtttgcccatcaggtgtctgcacc
aacacagagggttccttttcctgcacggcctgcgctcagggcttcacagtgacacccaat
ggcctctcatgtgaagatgtggacgaatgtcaggacaccagcctgtgtcttggaggccga
tgcaccaactccattggctcttttagctgctcatgtccatctggtcttgagttggttgat
gaaaagttttgcagagatgtggacgaatgcaacaacgacgacacgtgcgtccggggacag
tgcatcaacactgatggctctttcctgtgcttgtgtgaagccggctttaaatttagtgtt
gatacatctgactgtgaagaccaggatgagtgcaaggagtttggaagctcagtgtgtggt
acctggcgctgtgagaacaccatcggctcctataaatgcttcatgaaacatcagtcaagc
agtcttgaggaagattatgatattaatgagtgcaacaatgaaaccatctgtggggagcac
ggcttctgcgagaacacagacggctccttccgctgccagtgtgacagaggatacactaac
ccagccggggatgtgactcagtgtgttgatgtgaacgagtgcgagatgagctcggctctg
tgcggggacgccatgtgtgagaactacgatggaagcttcctgtgcatctgccccaacgac
aatgaggaattcgatcccatcaccagccggtgccgctccatggctatgtttgacaccaaa
cccgtttatccattcaccccctcctcggacgaaaggaaggagtgctactataacttgaac
gatgcgaactattgcaacaacgtcttgtctcgcaacaccacgaagcaggagtgctgctgc
accgccggggcaggttggggagacaactgcgagatccacgcctgtcctcttccaggaaaa
gacgattacaaccagctatgtcctcatggaagtggatttttaccgttgccagattcattg
aagcaaagtcatggaaatcggctgccttacatagatgccaatgaatgtgagatgttcgga
tcagagatctgtaagaacggacagtgttcaaatatattcgctacatacacttgcttctgc
cgctctggcttctactatgacaacatccggcttgagtgtgtagactatgacgagtgtcag
tttgagaatacctgtgagaacggcgcttgtgtgaacacggctggatctttcaactgtttc
tgtagtcctcctttagtcctggacagctcgcttcaccgctgcgtcagtcctaacagtaca
gaagaaacgtttgaatatggtcaagatgtgcatgaggatatttgctggcggcgactggag
gaagtaaacatgtgtgcagaccctctcccggagcgcagaactacctacactgaatgctgc
tgtctgcacggcatcgcctggagcgatcagtgtgccttttgccccaggaaagattctgct
gactatgcaacaatgtgcaacttaccctgggaaggaggctcagatagtcttcgagatcaa
ataggatttgagtacggtcccgagggcccagaagatccttctgtaccatttcttcctcca
tattgggataactatggtggccctggaggaacatatgacattcctgagagtgttcccctg
tttcatgatcatgactacaatgttcagcagcctcctgttcgtgtccccgtcgtgcgacca
gggagtcacccacagccagtgaatcctcacagtgagcaccacaatgccttcgagggtctc
caagcggaggaatgcgggatcttaaacgggtgtgaaaatggtcgctgcgttcgcgtgcaa
gagggctacacctgtgactgctttgacggctacgaacttgacctgagcaagatggcctgt
gtcgacataaacgaatgcgaggacatcagtgacaaggtccccttatgtcacaacggacag
tgcaccaacactgagggatcctacaagtgcacctgtttggcgggctttgtggcttcagca
aagccgcacacgtgcatcccaacaatcccagatccaaagctgagggactcggaaaaatga
DBGET
integrated database retrieval system
