Oryzias melastigma (Indian medaka): 112145661
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Entry
112145661 CDS
T07439
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112145661
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112145661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112145661
NCBI-ProteinID:
XP_024126789
Ensembl:
ENSOMEG00000021914
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All DBs
Position
LG5:12308884..12324807
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AA seq
634 aa
AA seq
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MESGPFSRKSWMTQSLRVTAKEMSLVSGRGKTSAIADRFSKYQRAAEEASSEKKKASSES
VTSSQRSGNLSVLKKRWEQAGDRNQEKSAPVPLTKQSSIRRRPPVLSRPPTISEDNPPMK
SHAPPADQRAPLSASKARQPSTAEDPEQGGMDGEELMDRNAPEKSEEQVLTSPIASYEKA
SVPLNNLKMKFEKGEDSKQSGRTTVLSTSSEDEPQHSKPPVTNRVLRSTSLREKMNKYQT
AVCKQSAKDVFAPKTNTSADEHTPATECNGQSTEQPKAPRKFCPPVREVCVVCQKTVFQL
ERLMSHQHVYHKNCFRCIHCNTKLSLGNYASLHGNIYCKPHFSQLFKAKGNYDEGFGHRP
HKERWEPRVDVEESEEPVKPKEPEKPETVKHPAENPSEVSSPGDASPQVKVLDLTASLEN
HVKAEEKHQPTEKPADARKLRVAWPPRVDEGESEKPLSPVAEDVPTIRPRRAKWPPDDAA
HPSLQSTERAELKSLRRSTSLKERSRPFTISVATKPPVNAGPRERRRPLRSLLEWRASFE
EKTSSEGRANENDTEVKEEQKTSSVTVSHRDTERLAKRQEPPSDDGASSQPKQNHTSKKV
GSTEEEKDVEELSAEDIIKKNRYYDDDDEEDPDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggtccgttcagtcgaaagtcatggatgacgcagtccctgcgcgtcacggcc
aaggagatgtctctggtcagtggccgagggaaaaccagcgccatagctgaccgattctcc
aagtatcagagagcggctgaagaagcaagttcagagaaaaagaaagcttcatctgaaagt
gtaacatcgtcccagcgttctggcaacctgagcgttctgaagaagcgctgggagcaagca
ggagaccgaaaccaggaaaagagcgctcctgtccccctaacgaaacagtccagcattcgc
cgccggcccccggtcctgagcagacctcctaccatcagcgaggacaaccctccgatgaag
agccatgccccgccggccgatcaaagagcccctctgtcagccagcaaagcccggcagccg
tccaccgctgaggatccagagcagggagggatggatggagaggagctgatggacaggaac
gctccagagaagtctgaggagcaagttctaaccagcccgatcgcatcttatgaaaaagcc
agcgtgccgctgaacaacctgaagatgaagtttgagaagggagaagactccaagcagagt
ggaaggacaacagtactcagcacttcatcagaggatgaaccccagcacagcaaacctcct
gtgacaaaccgagtgctgaggtctacatctctgcgagaaaagatgaacaaataccagacg
gctgtctgcaaacaatcggccaaagacgtttttgctccaaagacaaacacttctgcagac
gaacacactcctgccacagagtgcaatgggcagagcactgagcaacccaaggctcccaga
aagttctgtccgccggtgagggaggtttgtgtcgtttgccagaaaacggtgttccagctg
gagcggctgatgtcccatcagcatgtttatcacaagaactgcttccgctgtattcactgc
aacacaaagctgagtctggggaactatgcatctttgcatggtaacatctactgcaagccg
catttcagccaactgtttaaagccaaaggaaactacgacgaaggcttcggccatcgtcct
cataaagagcgttgggagccgcgggttgatgtggaggaaagcgaggaaccagtgaagccc
aaagaaccggagaaaccagagactgtgaagcatcctgctgagaacccctctgaggtgtcc
tcacctggagacgcctctcctcaggtgaaggtcctagacctcactgcctcactagagaac
catgtcaaggcagaagaaaaacatcagccaacagaaaaaccagccgacgcccgcaagctc
agggtcgcatggcctccccgcgttgacgagggcgaatccgaaaagccgctgagtcccgtc
gctgaagatgttcccacaatccgaccgcggcgggccaagtggcctccggatgatgcagcg
catccatctttgcagagcacagagcgggcggagttgaagagcctcaggaggagcacctcc
ctgaaggagcggagtcgcccttttacaatatctgttgccaccaaaccccccgtcaacgcc
ggtcccagagagcgccgccgcccgctcaggtctctgctggaatggagagcatcatttgag
gagaaaacctcgtctgagggaagagccaacgaaaacgacacggaggtgaaggaagagcag
aagacgtcaagtgtgaccgtctcccacagggacacggagaggttagctaaacggcaggaa
cccccgtctgatgacggcgcctcctctcagccaaaacagaaccacacctctaagaaagtg
ggttctacagaagaggagaaggatgtggaggagctgagcgccgaggatatcatcaagaag
aaccgctactatgacgatgatgacgaggaggatcctgatgcatag
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