Oryzias melastigma (Indian medaka): 112145704
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Entry
112145704 CDS
T07439
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112145704 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112145704 (irf6)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
112145704 (irf6)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112145704 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
112145704
NCBI-ProteinID:
XP_024126858
Ensembl:
ENSOMEG00000014527
UniProt:
A0A3B3DLH1
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All DBs
Position
LG5:complement(31289478..31300639)
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AA seq
484 aa
AA seq
DB search
MSVTPRRVRLKPWLVAQVNSGRYPGLEWIDREAMRFKIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPQPS
SNQDAGSWTPGDNDDGEEDLPNTPESLPPYPSNGTPSPHIMWSPMGSESSMPPPSCPSSN
EAWPKEEPVKIEPPDVEMQVTPMADLAPAPLPDPILQPTPLTDSFFASPEMWISSLPMTD
LEVQFLYRGKEMCPTATVSNQHGCRLFYGDLGPMVNQEELFGPVNLEQLRFPSPEHIAND
KQRVFTHRLLDVMDRGLILEVSGHDIYAIRLCQCKVYWSGPCAPNPAAPNLIERQRKVKL
FSLESFLTDVIAHQRSQSPSSPPFEISLCFGEEWPDGRPRERKLIMVQVIPVVARMISEM
FSNDSTRSFDSGSVRLQISIPDIKDNIVAHLKQLYCLLQTHQGQEGWAMPGGPGLNIAQA
LQTQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaccccccgccgcgtgcgcctcaagccctggctggtcgctcaggtgaacagc
ggacggtatccgggtctggagtggattgaccgcgaggccatgcgcttcaagatcccatgg
aaacacgccacgcgccacacaccccagcacgaggacgaggacaccatattcaaggcgtgg
gccgtggagaccgggaagttccaggagggagtggatgaacccgatcctgcaaagtggaag
gctcagcttcggtgcgccttgaataaaagcagagaattcaacctcatttatgacggcacc
aaagaggtccccatgaaccctctgaagatctatgacgtgtgcgacattccgcagccttcc
agtaaccaggatgctggatcttggacaccaggtgataatgatgatggtgaagaagatctt
ccaaacacgccagagtctcttcctccgtacccatccaacggcaccccctcaccacacatc
atgtggtctccaatgggctcagagtcctccatgccgccacccagctgtccctcctctaac
gaggcctggcccaaagaggagcccgtcaaaatcgagcccccagatgtggagatgcaggtt
acacccatggctgacctggctcctgctcctcttcctgatcccattcttcagcccacccct
ctgactgattcattctttgcctctccggaaatgtggatcagttccctcccaatgacggac
ctggaggtgcagtttctgtacagagggaaggagatgtgtcccactgcgacagtgagcaac
cagcatggctgcaggttgttttacggggacctgggacccatggtcaaccaggaggagctg
ttcgggccggtcaacctggaacagcttcgcttcccgtccccagaacacatcgccaatgac
aagcagagggtcttcactcaccgcctgctggatgtgatggaccgaggcctgattctggag
gtcagcggacatgacatttacgcaatccgcctctgccagtgtaaggtgtactggtccggc
ccctgcgctccaaacccagcggcaccgaatcttatagagcggcagaggaaggtcaaactt
ttctctctggagtctttccttactgatgtgatcgctcatcaacgtagccagtcaccgagc
tcccctccgtttgaaatcagcctttgttttggggaggagtggcctgatggaagacccagg
gagagaaagctcatcatggtccaggtcattcctgtggtggcccgaatgataagcgagatg
ttttccaacgacagcacccgatcctttgacagcggcagtgtccgcttgcagatttccatt
ccagacatcaaggacaacatcgtggcccacctgaagcagctgtactgcctactgcagaca
caccagggtcaggagggctgggccatgcctggtggccccggcctgaacattgcccaggcc
ctgcagactcagtga
DBGET
integrated database retrieval system
