Oryzias melastigma (Indian medaka): 112145778
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Entry
112145778 CDS
T07439
Symbol
tfap2c
Name
(RefSeq) transcription factor AP-2 gamma isoform X1
KO
K09177
transcription factor AP-2 gamma
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112145778 (tfap2c)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
112145778 (tfap2c)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
Motif
Other DBs
NCBI-GeneID:
112145778
NCBI-ProteinID:
XP_024126993
Ensembl:
ENSOMEG00000016630
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All DBs
Position
LG5:24371963..24384182
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AA seq
467 aa
AA seq
DB search
MLWKLADNVKYEDDCEERHDGNSNGNPRLPHLPAVSQHLYSPAPSLSHPASSDFQPPYFP
PPYQPISYPQPTDPYSHLSDPFNINSLQSPASNQQQPWPSRQGQEGLGAHGRSGLASQIL
GLEGGSSGVRREGFRRPELLPPHSLESSVIGDSIGITEMGPGLEDVQSVDDPGIIMADQT
VIKKVLGLRGGRNLDRLQTTYYQGGILAGPVTLPKGNSLGLPFQKESLLGMVSNPTEVFC
SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAIAEYLGRPHVERNEVN
SRKNMLLAAKQICKEFTDLLTQDRSPLGNGRPTPMLEPGIQGCLTHFSLITHGFGSPAIC
AAMTSLQNYLNEAIKQVDKMYLSSGSDTQGSSDSGSKSTDKMEKHRK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaaattagcagacaacgtgaaatatgaggatgactgtgaggaaaggcacgat
ggcaacagcaacgggaacccgcggctgccccacctgccagcggtcagtcagcatctctac
agcccggctccttccctctcacacccggccagctcggacttccagcccccgtacttccca
cccccctaccagcccatctcctacccacagcccacggacccctactcccacctcagcgac
cccttcaacatcaactccctgcagtcgccggcgtcgaaccagcagcagccgtggcccagc
aggcagggccaggaagggctcggcgcccatgggaggagcggtctggcgagtcagatcctg
ggcctggagggaggttcgtccggggtgaggagggaaggctttcggcggccggagctgctg
cccccgcacagcctggagtcgtcggttatcggggacagtataggcattactgaaatgggc
ccagggctggaagacgtccaaagtgtagatgatcctggtattatcatggcagatcagaca
gtcatcaaaaaagtattaggactacgaggtggcaggaaccttgatcgcttacagacgact
tattatcaggggggaattcttgctggtcccgtcactctacccaaaggcaactcactgggc
cttcccttccaaaaagagtcactcctgggcatggtatcaaaccccacagaggtgttctgc
tccgtaccgggccgcctctccctgctgagctccacgtccaagtacaaggttacggtggct
gaagtccagcggcgtttgtcacctcctgagtgcctcaacgcgtcgctactgggaggtgtt
ttacgcagagctaagtcaaaaaacggaggtcgctctctaagagaaaagttggataaaatc
ggactcaacttgcctgcgggaagaaggaaggcagccaacgttaccctactcacttcactg
gtggaaggtgaagctgttcatttagctcgagacttcggttatgtttgtgagactgagttt
cctgcaaaggctattgctgaatacctgggaagaccacacgtggagcgaaacgaggttaac
tctcgtaagaacatgctacttgctgccaagcaaatatgcaaggaatttacagacctgctc
actcaggatcggtcacctttaggaaacgggagacctacgcccatgttggagcctggaatc
cagggctgcttgacgcatttcagcctcatcactcacggcttcggctctccagccatttgt
gctgcaatgacctcactccaaaactacctgaatgaggcaatcaaacaagtggacaagatg
tatttgagctcagggagcgacacccaaggatcctcagacagtggcagcaagtctaccgac
aaaatggagaagcacaggaaatga
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