Oryzias melastigma (Indian medaka): 112145991
Help
Entry
112145991 CDS
T07439
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112145991 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112145991 (gfap)
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112145991 (gfap)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
112145991 (gfap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
GAS
DUF1664
TolA_bind_tri
Trimer_CC
BLOC1_2
DUF4515
Motif
Other DBs
NCBI-GeneID:
112145991
NCBI-ProteinID:
XP_024127294
Ensembl:
ENSOMEG00000019912
LinkDB
All DBs
Position
LG8:complement(3640694..3650495)
Genome browser
AA seq
445 aa
AA seq
DB search
MESQRVQSSYRKRFGPQGSSGAAGRLSSSRLSWHGTPRNISISTPISRTSLGSSLLLGSP
GDRLDFSADSLLKAQYKETRTNEKMEMMGLNDRFASYIEKVRMLEQQNKVLVAELNQLRG
KEPSRLGDIYQDELRELRRQVDNLTTGKARLEIERDNLAADLTTLKQRLQDEIGLRQEAE
NSLNAFRQDVDEASLSRVQLERKIDSLQDEINFLRKIHDEELRESQEKVLAQQVHVDLDV
SKPDLTAALRDIRIQYENLATSNMQETEEWYRSKFADLTDAANRNAEALRQAKQEANEYR
RQIQVLTCDLDALRGTNESLERQLREMEDRCAMETAGYQDTVSRLEEEIHALKEEMARHL
QEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETNLDSKTPEAHVKRS
ILVRTVETRDGEIIKESTTEHKDIP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagagagtccagtcctcctacaggaaacgtttcggacctcaaggctcgagc
ggtgcagcggggaggctatcgtccagccgcctctcctggcatggaacccctcgaaacatc
tccatctctacccccatatcccggacctccctggggtcctccttactgctggggagtccg
ggggaccggctggacttctccgccgactccctgttgaaggcccagtacaaggagacgcgc
accaacgagaagatggagatgatgggcctcaacgaccgcttcgccagctacatcgagaag
gtgcgcatgctggagcagcagaacaaagtgctggtggcggagctcaaccagctgaggggg
aaggagcccagtcgccttggagacatctaccaggacgagctcagggagctgcggcggcag
gtggacaacctgaccacggggaaggctcgcctggagatcgagagggacaacctggctgca
gatctgaccacgctgaagcagaggttgcaggatgagatcgggttgcgtcaggaagcagag
aacagcttgaacgccttcagacaggatgtggatgaagcgtctctcagtcgagtccagctg
gagaggaagatcgactctcttcaggatgagatcaactttttgaggaaaatacacgatgag
gagctgcgtgagtcacaagagaaagtcttggcccagcaggtccacgtggatctggatgtc
tcaaaaccagatctgactgctgctctgagagacatcaggatccagtatgaaaacctggcc
acctccaacatgcaggagacagaggagtggtatcgatccaagtttgctgacctgacagat
gcagccaatcggaatgcggaagccttacgccaggccaagcaagaggccaatgagtatcgc
cgtcagatccaagtgttgacctgcgacctggacgctctccgagggacaaacgagtctctg
gaacgccagctgcgggagatggaggaccgctgtgccatggagacagccggttaccaggat
acggtgagccgcttggaggaggagatccatgctctgaaggaggagatggcgaggcatctg
caggaataccaggacctgctcaacgtcaagctggcgctggatatcgagatagccacctac
agaaaactactggagggggaggagagcaggattaccattccagttcagagtttctccaac
ttgcagttcagagaaacaaatttggactccaaaactccagaggctcacgtgaagaggagc
atcttggttcgcactgtggagaccagagatggtgagatcattaaggaatcgaccactgag
cacaaggacattccttga
DBGET
integrated database retrieval system
