Oryzias melastigma (Indian medaka): 112146041
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Entry
112146041 CDS
T07439
Symbol
sun1
Name
(RefSeq) SUN domain-containing protein 1 isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112146041 (sun1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112146041 (sun1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
112146041 (sun1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
HTH_SUN2
TiaS_FLD
Motif
Other DBs
NCBI-GeneID:
112146041
NCBI-ProteinID:
XP_024127374
Ensembl:
ENSOMEG00000010585
LinkDB
All DBs
Position
LG8:12035927..12056701
Genome browser
AA seq
1064 aa
AA seq
DB search
MQEEFKQRRMTMDFSQLHTYTPPQCSPENTGYTYSLSSSYSTAALEFEKEHQIAPVYESP
RMSRRSLRLQSSAGHYDNEGLADYCHNQSSSYTNKETRTVRSRKHQQQQQSLSSSMSLSL
SQVATPRQTLSFSAVSTPIDGSSRVQESSTESEASQLTSAYSRSQMRKQSVSTISTTSTV
DVCWVQSSAHKSSANGGASSSKSHVALSNGYICNNCSLHSQKTNTCTAKSSCQAQELSTQ
ALSSSSSSPFTSVYTRDRSRKNKTGVLMSVSNTCMRYSKQALVPIVSLVTLLLSSVVQLG
SRAVSLTGKGIPTAFLDSVRRASSSSLSKMWLFRSNILRRMIGSSEKYYEDSAHSSISGS
TNISDQSTEDASHLNLNGSQCNDSTGKHYSATSTVLLSERSRSKGVVGALWSVLVFTGYG
LLLPGYVVVKASSALASGFYSGAKNLLSCLWLLVTTPVKASKGLLWFLGKGWYQLVSLMS
LLNVFFLTQCVPRLWKLLLFLLPFLLLLVLWLWGPSAATLFAYLPTINLTEWNLASPFSF
SNFKTIPASVPATEPPMKQGPVAPVSQATPVLPPSATLNVDLKRLEDVEHQLALLWERVK
QEDEQQEQRHQDIFSLYTKLREQLHTQTNRESLGVWVSSLLEERLGTLRENLEQANTQRT
QSEKQQEQQQESQDTRLAELELLLKALSVKTEEMQQKQQQYERWKEEKEKEVVPPAVETP
VSVGVKQESHDALLVEVQRLEAELAKIRQELQAVVGCKGKCEQLDTLQETISAQVSSQVR
RELQVLFFGPEDQQSEVPESLISWLSQRYVSTPNLQAALASLELNILKNISQQLELSRAQ
TVTEAEFKAQNMVQTITGTVQHTSSSEGLTEEQVKLIVQNALRLFSQDKTGRVDYALESG
GGSILSTRCSETYETKTALMSLFGLPLWYFSQSPRVVIQPDVYPGNCWAFKGSQGYLVIR
LSLRILPTSFCLEHIPKALSPTGNITSAPRNFTVFGLDDEYQDKGKLLGHYTYEENGEAL
QIFPVKEENDKTFQIIEVRVLSNWGHPEYTCLYRFRVHGEPRPE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagagtttaaacaaagaagaatgaccatggatttttcccagcttcacacatac
acgcctccacagtgttctccggaaaatactggctatacgtactctctcagttccagctac
tccactgcagcattagagtttgaaaaggagcaccagattgctcctgtgtacgagtcgccc
agaatgtcacggcgaagcctgcgtctgcagagcagcgccggtcactatgacaacgagggc
ctggctgattactgccataaccagagcagcagctacaccaacaaagagacgcggacggtt
cggagtcgaaagcaccagcagcagcagcagtctttgtccagctcaatgtctttatccttg
agccaagtggccacaccaaggcaaaccctatccttctcagctgtcagcaccccgattgat
gggagcagcagagttcaggagagcagcacagagtctgaagcatctcagctcacatcagcg
tacagcagatctcaaatgaggaaacagagcgtctccactatcagcaccacctctactgtg
gacgtatgctgggttcagagttcagctcacaaatcaagcgccaacggtggagccagctcg
tcgaaatcccacgtggctctcagtaacggatacatctgcaacaactgttctttgcactct
cagaaaacaaacacttgcacagcgaagtcgtcatgtcaggctcaagaactctccacccaa
gctctgtcctcctcatcatcctcgcccttcaccagtgtgtacaccagagacaggagtcga
aaaaataagacgggcgtcctgatgtcagtgtctaacacgtgtatgcgctacagcaaacaa
gccctggtccccatagtgtccttagtcactcttctcctcagtagtgtggttcagctggga
tcaagggctgtaagcctgacaggaaaaggtattcccacagcatttttggactcggtgaga
cgagcatcatcttccagtttgtccaaaatgtggctatttaggtcaaacattctccgcagg
atgattggctcctcggaaaaatactatgaagattcagctcattcgtctatctctggaagc
acaaatataagcgatcagtcgacagaagacgcctcacatcttaatctcaacggctcccag
tgcaatgacagtacagggaagcattattctgcaaccagcacggtcctcctctcagagcgc
tccaggtccaaaggtgtggtgggagcactgtggagtgtcttagttttcacaggttacggt
ctcctgctgccgggttacgttgtggtgaaagccagcagcgctttggcttcagggttttac
tctggagcaaagaatctgctttcttgtttgtggctgctcgtgacaactccagtgaaagca
agcaaaggtttactttggttccttgggaaaggatggtaccagctggtgtctctgatgtct
ctcctcaacgtcttctttctgacacaatgtgttcccagactctggaagctcctgctgttt
cttttaccctttttactgctcctcgttttgtggttgtggggcccgtccgctgcgactctg
ttcgcctaccttccaaccataaacctgaccgagtggaaccttgcatctccattctccttc
tccaactttaagacaatccccgcttctgtccctgcaactgagcctccaatgaagcagggt
ccagtcgccccggtctcacaggcaacgccggtccttcccccttctgcgaccttgaatgtg
gatttaaagcgtcttgaagatgtggaacatcaactggctctgttgtgggagcgagttaag
caggaggacgagcagcaggagcagcgtcatcaggacatcttcagcctgtacaccaaactg
agggagcagcttcacacgcagaccaacagagagagcctgggagtgtgggtgtcctcgctc
ctggaggagcgactgggcacgctcagagagaatctagagcaggcgaacacacaaagaaca
cagagtgaaaagcagcaggaacaacaacaggagagtcaggatacccggctggctgaatta
gaattgctgctcaaagctttgtctgtcaaaactgaggaaatgcaacagaaacagcagcag
tacgagcgctggaaggaagagaaggagaaggaggttgtcccgccagcagtagaaacacct
gtgagcgtgggtgtgaagcaggagagccacgatgctctgctggtggaggtgcagaggctg
gaggcggagctagctaaaatccgacaggagctacaggcggtcgttggatgtaaggggaag
tgcgagcagctggacacgctgcaggagacgatatcagcacaggtgtcgtcgcaggtgcgc
agagagctgcaggtgcttttctttggaccagaggaccagcagagcgaagtaccggagtcc
ctgatcagctggctgtcccaacgctacgtcagcacaccgaatctccaggcggcgctggcc
tctctagaactgaacatcctgaagaatatatcgcagcagctggagctcagccgagcccag
actgtgactgaagccgagttcaaagcccagaacatggttcagacaatcaccgggactgtc
caacacacgtcatcttcagaaggactgacagaagagcaagtgaagctgattgtccagaac
gctctgaggctgttctcccaggacaaaacaggccgggtggactacgccctggagtctgga
ggtggcagcatcctcagcactcgctgctcggagacgtacgagaccaagacggccctcatg
agtctgttcggcctgccgctctggtacttctctcagtctccgcgagtcgtcattcagccg
gatgtgtatcccggtaactgctgggcgtttaaaggctcccaaggttatctggtgatcagg
ctctccctaagaatcttaccaacatccttctgtctagaacatattcctaaagctctgtcc
ccaactggaaacataaccagtgctccacgcaacttcactgtctttggtctagatgatgag
taccaagataaaggaaagctgctaggccactacacttatgaggagaacggggaagcatta
cagatcttccctgtgaaggaggagaatgacaagactttccagattattgaggtgcgcgtg
ctgtccaactggggtcaccctgaatacacctgcctgtaccgcttcagagtccacggagag
ccgcggcccgagtga
DBGET
integrated database retrieval system
