Oryzias melastigma (Indian medaka): 112146045
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Entry
112146045 CDS
T07439
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112146045 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112146045 (llgl1)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112146045 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
ANAPC4_WD40
Lgl_C
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
112146045
NCBI-ProteinID:
XP_024127389
Ensembl:
ENSOMEG00000021788
LinkDB
All DBs
Position
LG8:17233440..17267529
Genome browser
AA seq
1066 aa
AA seq
DB search
MMKFRFRRQTTDPQREKIKQELFAFRKTVEHGFPHQPSALAFDPKLQLMAIGTKSGAIKI
YGAPGVEFTGLHKDTTAVTQILFLPGQGCLLSLLDDNTIHLWELVAGVTREVGGVKKEGV
VSLREVDSYCLPGRPGIESSSATRVTVLHLLKSCDLLCVGTEGGGVYVLELPRLSLKENQ
TLLQDHVTQSLPDDYRCGKSLGPVESLQEHPQQAGKILIGYSRGLVVLWDLSSRHADQLF
LGKQQLESLVWERSGNLFVSSHNDGGYSVWAVTNGNVYNNQPVSSTIPYGPFPCKAIPKI
LWRTTQSSSPVILYSGGMPRASYGDRHCLTIQQDKEHVTLDFTSRVIDFFTVHNVDDDKE
FDDPSALVVLLEEELVVIDLLTPGWPSLPTPYLAPLHSSAITCSCHVTNVSTKLWERLIN
AGKAQQSRRHTHKSWPICGGKSLAPPPKQQELLLTGHEDGTVRFWDASGVALTPLYKLST
ANVFHTDCDPVDDPHDDPDMQQEEEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYSNKL
VVAGTAGQVIILGLNDERSDHLVDVSVMDLLQDREGFTWKGHDRLEPRLKPAPFPPGFQP
LVLLQCLPPASVTAVALHAEWNLVAFGTSHGFGLFDYHRRNAVLARCTLHPNDSLAMEGP
LSRVKSLKKSLRQSFRRIRKSRVSGKKRVLTTPTSKVQEANAALAEQEEVAPVQRRIEPR
SADDSLSGVVRCLCFADTFLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGLGRTCERGGA
SESSMCVEAVLGKEIQLMHRAPVVSICVLDGRGKPLPDPYEASQDLAIAPDMTNAHSVLI
ASEEQLKVFSLPKVSAKTKFKLTAHEGCRVRKVALVLFSSSVQEDYSEHTLVCLTNMGDM
HLFNIPGLRPQVRFDCIRKEDISGIASCVFTKNGQGFYLISPSEYERFSLSAKVLTEPLC
SVQLHRHLEQTFTCDGTPTHMQANGTHKNQMGQAEGKVDVPLSTLPSPLLDTPLDSPLSC
ADLTLDSTGELTVEDVRDFLTTVDEEENNLRNMKDEEGRSPGILIN
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttcaggtttcgtcggcagaccaccgacccgcagagggagaaaataaaacag
gagcttttcgccttcagaaagacggtggagcatggtttcccccatcagcccagcgctctg
gcctttgaccccaaactgcagctgatggccatcggcacaaagtcaggagccatcaaaatc
tatggagcacctggggtggagttcacaggacttcacaaagacaccaccgcagtcacacag
atcctcttcttgcccggtcaggggtgcctcctctcactgctggatgacaacacaattcat
ctgtgggaacttgtagctggggtcaccagagaggtgggaggggttaaaaaagagggtgtg
gtttccctccgtgaagtggacagctactgtctcccagggagacccggcatcgagagcagc
agcgccacccgggtgactgtcctccacttgctaaagtcatgtgacctgctctgcgtggga
acagaaggtggtggcgtttacgtcctggagttgccccgcctctcgttaaaggaaaaccag
acgctgctgcaggatcatgtcactcaaagcctgccagacgattacagatgtgggaaatca
ttaggaccggtggagtctcttcaggaacaccctcagcaggcgggcaagattctgatcggc
tacagccgcggcctggtggtcctctgggacctgagttcccgtcacgccgaccagctgttc
ctcggaaagcagcagctggagagcctggtctgggagcgttctggaaacctcttcgtcagt
tcccacaatgatgggggctattcagtgtgggccgttaccaacggaaacgtctacaacaac
cagccggtgtcctctactattccatacggtccgtttccctgcaaagccatcccaaagatc
ctgtggaggacgacacagtcgagttccccggtgatcttgtatagtggaggaatgccacga
gccagctatggagaccgccactgtctaaccatccagcaggacaaagagcacgtcactctg
gacttcacgtctcgcgtgatcgatttctttactgtccacaacgtggacgacgacaaagag
tttgacgacccgtcggctcttgtcgtgctcctggaggaggagctggtcgtgatcgacctg
ctgacccctggctggccctcgcttcccactccttacctcgctccccttcactcgtcagcc
atcacgtgttcctgtcacgtcaccaacgtctccaccaagctgtgggaacggttgatcaac
gccggcaaagcgcaacagagccggcgccacacacacaaaagttggccaatatgtggtggg
aagagcctggcacccccacccaaacaacaagagctactgctgacggggcacgaggacggc
acggtccgtttctgggacgcctcgggtgtcgctctgactccgctgtacaaactcagcaca
gccaacgtcttccacaccgactgcgacccagtcgatgacccgcacgatgacccagacatg
cagcaggaggaggaggaggagtggcctccctttaggaaggtgggctgttttgacccgtac
agtgacgacccccgcctcggcattcagaagatcagtctgtgtaaatacagcaacaaacta
gtggtggcgggaacagctggacaggtcattattctgggattaaatgacgagcgttcggac
cacttggtggacgtgtcggtgatggacctgctgcaggaccgggagggcttcacctggaag
ggtcacgacagactggaaccccgcctcaaacctgcccccttcccgccaggcttccagccc
ctggtgctgctgcagtgcctgccccccgcctcagtcacggcggtggcgctgcacgccgag
tggaacctggtcgcctttgggacgagccacgggtttggacttttcgactaccacagacgg
aatgctgttctggccaggtgcaccttgcacccaaatgactcgttggcgatggaaggcccc
ctgtccagggtcaagtcattaaaaaagtcgctacgccagagcttcaggcgcatccgcaaa
agccgggtgtcggggaagaagcgggtcttgaccacgcccaccagcaaggtccaagaggcc
aacgccgctctggccgagcaggaggaggtcgctccggtgcagcgaaggatcgagccgcgg
tcagcggacgactctctgtccggcgtggtcagatgtttgtgctttgcagacacatttctg
cgtgacggcacacaccacggccccacgctctgggcggggaccaactctggtagcgtgtat
gcttatgccctggaggtgcctggcgtgggtttggggcgcacgtgtgagcggggcggagcc
agcgagagcagcatgtgcgtggaggcggtgctgggtaaagagatccagctgatgcacagg
gctcccgtggtgtccatatgcgtgctggacgggcgaggaaaaccgctgcccgacccgtac
gaagcgtcccaggacctggccatcgcgccggacatgaccaacgcccactcggttctcatc
gcttcagaggagcagctgaaggtgttttctcttcccaaagtgagtgcgaagaccaagttc
aagctgacggctcatgaaggctgccgggtgaggaaggtggctctggtgctcttcagctcc
agcgttcaggaggactacagcgaacacacgctggtctgcctcaccaacatgggagacatg
cacctcttcaacatccctggcctccgacctcaggtgcgtttcgactgcattcggaaggag
gacatcagcggcattgcgtcgtgcgtcttcaccaagaatggacaggggttctacctaatc
tctccatcagagtatgagaggttctctttgtctgcaaaagttctcaccgaaccgctgtgt
tctgttcagcttcaccgacacctggagcagacgttcacctgcgacggaacgccgacgcac
atgcaggccaatggaacccataaaaaccagatgggtcaggctgaagggaaggtggacgtc
cctctcagcaccctgccctcccccctcctggacaccccactggactcccccctcagctgt
gctgacctcaccttagactcgaccggagagctgacggtggaggacgtcagggacttcctc
accacggtggacgaggaggagaacaacctgaggaacatgaaggacgaagagggacgctca
cctggcatcctcatcaactga
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