Oryzias melastigma (Indian medaka): 112146103
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Entry
112146103 CDS
T07439
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112146103 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112146103 (nup85)
03036 Chromosome and associated proteins [BR:
oml03036
]
112146103 (nup85)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112146103 (nup85)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112146103 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
112146103
NCBI-ProteinID:
XP_024127520
Ensembl:
ENSOMEG00000014029
LinkDB
All DBs
Position
LG8:complement(13421795..13429549)
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AA seq
652 aa
AA seq
DB search
MEEVDVEPTVTNIPALRRGTHMGFAWGPGNIFVYETVFKAAGAPGSGSPFIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVST
KDAEISTQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKARD
VLQSDSPAEHRDYWDVVVSYVLQGRLDEARQMLVKQATLMPAAKNIYKMMDNLLSKMPFY
NPGGTQTLTEFDVKWRHWHEDVDRCLQDNSFASNKHLEVICKILLGDEDTLLEHKDLLGT
WYHFLVTRLLFCHPTVKPTELHYYAQSCMTMFLDSRSAPEPLDSILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDHCLEFGRVYLELQIERVPLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYRE
FHKLYGEKRFKEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTYELMFC
LEELTSSLNTPSPDSDKSMQEEDVELTKVELLRLALSRNLAMAIVKEGTVET
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtcgacgttgaaccgactgtaaccaatattcctgcactcagacggggaacg
catatgggctttgcatggggtcctggtaatatctttgtctacgagaccgtcttcaaagca
gctggtgctccaggatcaggttctcccttcatccatgaagttaggaaagatgaggacatc
tattctcctattttacgcaaactctttaatgagtcccatcacatttttgttggcttgcaa
acaatcagggaggatctccccagcaagaacaagaaacctcagtttgtcagcattagtaaa
aactatcgatcagttattcgagcctgcatggaggagcttcagcaggttgcagtttccaca
aaagacgcagagatttctacacaatatggaaaccaggtgtccattcttttggccatagaa
ctgatctggaatctgtgtgaagtccttttcatcgatgctgcccctgcgggctcgctcttg
cttcatctcctggactgggtgaggctgcacaaggctgacgtggacgagaaggctcgcgac
gtgctgcagagtgacagccctgctgagcatcgagactactgggatgtggtggtgagttat
gtgctgcagggcaggttggacgaagccagacagatgctggtgaaacaggccaccctgatg
cctgccgcaaagaacatctacaagatgatggataacttactcagcaagatgcctttttac
aatcctggtggcacccagacactgacagagtttgatgtgaagtggaggcactggcacgaa
gacgtagaccgctgcttacaagacaactcttttgccagcaacaaacatctggaggtcatc
tgcaagatcctcctgggtgatgaagacactctactggagcacaaggacctgctgggaacc
tggtatcacttccttgtcactaggctgcttttctgtcaccccactgtaaagcccactgag
ttgcactactatgcacagtcatgtatgaccatgtttctggactcgaggagcgctccagaa
cctctggacagcatcttactggctgcctttgagtttgacatccatcaagtgattaaggat
tgcagcattgctctcaacaactggtggtttgtggcccatctgacggatttgttggatcac
tgcaaactcctccagtctcacaatctacactttggctccaatttaagagaattcctgctg
ttggaatacgcctcaggtctctttactcatcacagtctgtggcagttggccgtggattac
ttcgatcactgcctggagtttggtcgtgtctaccttgagctccagatcgagcgcgtccct
ctagacacggagcgcaaagcactaaaggtcctccggatttgtgagcagagacagatgtcc
gagcaagtgcggagtatctgtaagatcatggccatgagagccttaagaaacaacagactt
ggctccgccctctcctggagcatcagagccaaagatgccgcctttgccaccctcatctct
gaaaggtttttacaggattactgcgccaaaggaaccttttctgatctggatttgatcgac
aacttgggtccagccatgctgctgagcgacagactcacttttcttgggaagtaccgtgag
tttcacaagctttacggggagaagcgcttcaaggaggctgcaaagctgcttctctctctc
atgacggctaagattgctccccggagcttctggatgaccctgctgactgatgccctgcct
ctgctggagcagaaagaggtgatcttctcagcagaccaaacctacgagctgatgttctgt
ttagaggagctcacgtcctcactgaacactccatctcctgactcagacaaatccatgcag
gaggaagatgtagagttgaccaaagtggagctcctgagactcgctctgtcaagaaacctg
gccatggccatagtcaaagagggaacagtggaaacatga
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