Oryzias melastigma (Indian medaka): 112146117
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Entry
112146117 CDS
T07439
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112146117 (gabrb1)
04082 Neuroactive ligand signaling
112146117 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112146117 (gabrb1)
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112146117 (gabrb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112146117
NCBI-ProteinID:
XP_024127550
Ensembl:
ENSOMEG00000006350
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All DBs
Position
LG22:23396160..23430102
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AA seq
471 aa
AA seq
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MWVTVGCCLSLLASVTSAAQSANEPSNMSYVKATVDKLLKGYDIRLRPDFGGAPVDVGMS
IDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPDTYFIND
KKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTT
DDIEFYWQGGSNAGSVTGVENIELPQFSIIDYQTLSTKAVFATGSYPRLSLSFKLKRNIG
YFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK
AIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKAAEKAKSNNENRSRMESSRVQVD
AHGSILLSNMPTEMGGPDMMSSLHDPRATMFSYDSASIQYRKPMASRDLYGRPAIDRPLG
PKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVVFPITFIFFNLVYWLYYVH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgacggtcgggtgctgcctgtctctgctggcgtctgtcaccagcgctgcgcaa
agcgcaaacgagcccagcaacatgtcgtatgtgaaagccacggtggataagttgttgaag
ggctacgacatccggctgcggcctgattttggaggcgcgcccgtggacgtgggcatgagc
atagacatcgccagcatcgacatggtgtctgaagtcaacatggactacaccatcaccatg
tactttcagcagtcctggagagacaagcgcctgtcctacaccggcatccctctcaacctg
acactcgacaaccgagtcgccgatcagctctgggtccccgacacctacttcatcaacgac
aagaagtcttttgtccacggggtgacggtgaagaaccggatgatccgactgcaccctgat
ggcaccgtgctctacggcctcaggatcactacgacagctgcctgcatgatggacctgcgc
agataccctctggatgagcagaactgcactctggaaattgagagctatgggtacaccaca
gacgacattgagttctactggcagggcggcagcaacgccggctccgtcaccggggtggag
aacatcgagctgccccaattctccatcatcgactatcaaaccctctccaccaaagctgtg
tttgccacaggttcttatccacgtctgtcacttagcttcaagctaaagaggaacattggt
tacttcatcctgcagacctacatgccctccaccctgatcaccatcctgtcctgggtctcc
ttttggataaactacgacgcttctgctgccagggtcgccttaggtatcaccactgtgctg
accatgaccaccatcaacacccatctcagagagaccctgcctaagatcccttacgtcaag
gccattgatatttacctgatgggctgctttgtcttcgtgttcctggccttgctggagtac
gccttcgtcaactacatcttcttcggccgaggtcctcacctgcagaagaaggcagcagag
aaagccaaatccaacaacgagaacagaagcagaatggagagcagcagggttcaggttgat
gctcacggcagcatcctcctgtccaacatgcccacagagatgggtggaccagatatgatg
agctcgctccatgacccacgggccacaatgttctcctacgacagtgccagcatacagtac
cgaaagccgatggccagccgggacctttacggacgacctgccatcgaccgaccactcgga
cctaagaaaagccgcttgagaaggagggcctctcagctgaaagtcaagataccagacctc
acggatgtcaacgccatagacaagtggtcccgagtagtttttcccatcacattcatattc
ttcaacctggtgtactggctgtattatgtccactag
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