Oryzias melastigma (Indian medaka): 112146227
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Entry
112146227 CDS
T07439
Symbol
hrob
Name
(RefSeq) homologous recombination OB-fold protein
KO
K27803
homologous recombination OB-fold protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112146227 (hrob)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112146227 (hrob)
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Gene cluster
GFIT
Motif
Pfam:
HROB
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
112146227
NCBI-ProteinID:
XP_024127700
Ensembl:
ENSOMEG00000020806
LinkDB
All DBs
Position
LG8:4344944..4356264
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AA seq
653 aa
AA seq
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DSSSCTHTEWLPAQASWRAVQPPGSAFTSAPRNSSSSTHAACPLPAARRKAEVCFTLETC
RLGGLFSLDEDFDDEDVLGTDWSAGSTSKAASVVATEQEESRGSPPPACDGTISSTLRTA
AQNPALGLRQIPSTSRVLRPPLVSPNNSQQDLASQNHTNPKSFQRSSPDLEDFDDWDVDF
ADLDEFDRSTKPPPPPPPPAEPSSSTKTLRPSALRSNAPPDRTFGEHRTSGLPGSTAAPR
SLPAPSHPPQTPAVLRSLTGPSHPPQTPAVLRSLAGPSHPPQTPGTSPASSSFSRILPNP
QQTHKPWTTPRASPQARGLFETVSPSVPASPHSPHPLHTPILTNRLVQLVSASSKLPKKR
PRSESRQPRTRRFPGPAGLLPQQPQGQNLDQIVVSVPQTPAHGAAARPPSQASCSQTEEE
EFSAGGWAAMKAEMGLDERNPSCFLHSYSVVMVLRKAALKQLARNKVPNMAVLLKSIIHT
NADAKAVFRDPTGEMQGTVHRRLLEERAEELKVGAVLLLKQVGVFSPSHRNHYLNVTPNN
LLRIYAPDGVAASSTRLPPLDLESPPTRTPSVRREALSQMQLVFDEEDDEGERGAGGSAG
PPAKSHTEIKTSFSSGGAPQEHAGNAVLQDGGWDADDDLDELLGALPEDACSL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gacagcagcagctgcacgcacactgagtggctgcctgcgcaggcgtcgtggagagccgtg
cagcctccagggtcggcgttcacctctgctccccggaacagcagctcctccacacacgct
gcgtgccctctgccagcagccaggcgtaaagctgaggtctgcttcactttggagacctgc
agactgggggggctgttcagcttggatgaagactttgatgatgaggatgttctcgggact
gattggagcgccggatccacctctaaggccgccagcgttgtagccacagagcaggaagaa
agccgtggcagtccaccgccggcgtgtgatgggacgatatcgagtacactcaggactgct
gcacaaaaccccgctttgggtctcagacagatcccctccaccagccgggttctccgaccc
cctctggtttctccaaataactctcagcaggatttggcatcacagaaccacactaacccc
aaaagctttcagagatcctccccagatctggaggatttcgatgactgggatgtcgatttt
gcagacttggatgaatttgacaggtcgacgaagccgccgccgcctcctcctcctcctgca
gaaccctcatcctcgaccaaaacactgcgaccgtctgctttaaggagtaatgctcctcct
gataggacgtttggagagcacaggacttctggattgcctggttctactgcggcaccacgg
agcctccctgcaccttcacatccccctcagactcctgcggttctccggagtctcactgga
ccttcacatccccctcagactcctgcggttctccggagtctcgctggaccttcacatccc
cctcagactcctggaacttctcccgcttccagcagcttttcccgaatacttcccaaccct
cagcagacgcacaaaccatggacaactccccgcgcctcccctcaggcccgcggactcttt
gaaacggtctctccttcagtgcccgcctcccctcacagtccccaccccctgcacaccccc
atcctcaccaaccgcctggtccagctggtgtccgcgtccagcaagctccccaagaagaga
cctcgctcggaatcccgccagccgagaacgcggcgttttccgggtcctgcaggacttctg
ccgcagcagcctcaggggcagaacctggaccagattgtggtttctgttcctcagacgccc
gctcacggggcggcagctcgaccgccgagccaggcctcctgctcgcagacggaggaagag
gagttcagcgctggaggctgggctgccatgaaggcagagatgggactggatgagaggaac
ccctcctgcttcctgcacagctacagcgtggtcatggtgctccgaaaggcggcgctcaaa
cagctggcgaggaacaaagtgccaaacatggccgtcctgctgaagagcatcatccacaca
aacgctgacgccaaagccgtgttcagagacccgacaggagagatgcagggaacggtgcac
cggcgcctcctggaggagcgagccgaggagctgaaggtcggagccgttctgcttctcaaa
caagtgggtgtcttctccccctcccaccgcaaccactacttgaatgtgacgcccaacaac
ctgctgaggatctacgcccctgacggagttgctgcgtcttccactcggctcccgcctctg
gacttggagtccccccccacgcggaccccctctgtccgccgggaggcgctgtctcagatg
cagctggtgtttgatgaagaggatgacgagggggagagaggagcggggggatctgcaggc
cctccagccaaaagtcacactgagattaagacatccttcagctccggcggagctccccaa
gagcatgctgggaacgcggtgctgcaggatggaggctgggatgcagatgatgacctggat
gagctgctgggagcgttgcctgaggacgcctgcagcctctga
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