Oryzias melastigma (Indian medaka): 112146243
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Entry
112146243 CDS
T07439
Symbol
ngfra
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
oml04010
MAPK signaling pathway
oml04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
112146243 (ngfra)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112146243 (ngfra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112146243 (ngfra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
oml04050
]
112146243 (ngfra)
04090 CD molecules [BR:
oml04090
]
112146243 (ngfra)
Cytokine receptors [BR:
oml04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
112146243 (ngfra)
CD molecules [BR:
oml04090
]
Proteins
112146243 (ngfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
DUF8429
Motif
Other DBs
NCBI-GeneID:
112146243
NCBI-ProteinID:
XP_024127719
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All DBs
Position
LG8:complement(4207105..4249155)
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AA seq
382 aa
AA seq
DB search
MRRPAERLCSSSQLLILCSRSVSCESSRRSRMTSVLWVLTLCVLVALAQANKTERGLAPP
CDTGRYTKDGECCTVCPPGEGVLVECGAKQTVCTQCLDSETFSENYSVTEKCTDCTQCLG
LMRMVAPCTDISDAKCQCDYNFFFNPLSGRCERCTVCPRGRGVYSQCDHYHDTICEDCVD
ETYSDQDSSVEPCLPCTICEENIETLESECTPTTDTVCFNPNAPTDVSLTSEMTDIYSSE
VLPYNPESPWPSSETTTPRANSPRFLGHGFNENLIPIYCSILAAVVVGLMAYIVFKRWNS
CKQNKQAANNRAATNNQMVTPEGEKLHSDSGISVDTQSLQEQQQQQHGPADVQPQPSRSH
TQEQIVVRVDGGSQPDSPHPKV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtcctgccgagcggctctgctcttcctcgcagctcctcatcctctgctccaga
tctgtttcatgtgagtccagcaggagaagcaggatgacttctgtcttatgggttttgact
ttgtgcgtgctggtggctttagcgcaggcgaacaagacagagcgaggtttggctccgccc
tgtgacaccggccgctacaccaaagatggagagtgctgcacagtgtgtccacctggagag
ggagtgctggtggaatgtggcgccaaacagactgtatgcactcagtgtttggacagtgag
accttctcagagaactacagcgtcacagagaagtgcacagactgcactcagtgtttgggt
ttgatgcggatggtggcgccctgcaccgacatcagcgacgcaaagtgtcagtgcgactac
aacttcttcttcaaccccttgtccggccgctgcgagaggtgcacggtgtgccccaggggt
cggggcgtgtactcccagtgcgaccactaccacgacacgatctgcgaggactgtgtggat
gagacgtactccgaccaggatagctccgtggagccctgcctgccctgcaccatctgcgag
gagaacatagagacgctggagtctgagtgcacgcccaccacagacacggtgtgcttcaat
cccaacgcccccacagatgtcagcctaacctcggagatgacagatatctactcctctgag
gtcttgccctacaacccagaaagcccctggccgagcagcgagaccaccacccccagggcc
aactcacctcgcttcctgggccacggcttcaacgaaaacctcattcccatctactgctcc
atcctggctgctgtggtggtggggttgatggcgtacatcgtgttcaagaggtggaatagc
tgcaagcagaacaaacaggcagctaataaccgcgcagcgacaaacaaccagatggtgacg
ccggagggggagaagctgcacagcgacagcggcatctcagtggacacccagagtctgcag
gagcagcagcagcagcagcacggtccggctgacgtccagcctcagccgtcacgctcacac
acacaggaacagatagtggtgagggtggacggcggctcccagccggattcacctcacccc
aaagtctga
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