Oryzias melastigma (Indian medaka): 112146254
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Entry
112146254 CDS
T07439
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
oml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112146254
03015 mRNA surveillance pathway
112146254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112146254
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112146254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112146254
NCBI-ProteinID:
XP_024127730
Ensembl:
ENSOMEG00000009404
LinkDB
All DBs
Position
LG8:complement(11529830..11532540)
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AA seq
275 aa
AA seq
DB search
MAPSPTKRKEDEKKDKGKEKTKEGDKERARDKSRKGRSASSGSSSSRSSSSSSSSSGSSS
GSSSGSSSSSSRSGSSSSRSSSSSSSSASPSPSRRRHDNRRRSRSPGSKTQKRGEERERR
KRSPTPKPTKIHLRRLTRNVTKEHIQEIFSTYGKIKTIDLPVERLLPHLTKGIAYVEFET
PEEAQKALKYMDGGQIDGQEITAAAVLTQMIRGPARRMSPPRRMPPPPPMWRRSPPRMRR
RSRSPRRRSPPRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcaccaacaaagcgaaaggaggatgaaaagaaagacaagggcaaagagaaa
acaaaggaaggagacaaggaacgggctcgagataaatcaagaaaaggccgcagtgcttca
tcaggcagctccagcagcagatcgagctcatcctccagcagcagctctggttctagctct
ggttcttcaagtggttccagctcctcttccagtcgctctggatcctccagctctcggtcc
tcctcctcctccagctcctctgcctctccaagtcctagccgcaggcgccacgacaaccgg
cgccgttctcgctctccgggttctaaaacacagaagagaggagaagaaagagaacgaaga
aaaagaagccccacccctaaaccaactaagattcacctgagaagactgacgaggaatgta
actaaggaacacatccaggaaattttctccacatatggaaaaattaaaacgattgacctg
ccggtggaaaggctccttccacatctgaccaaaggcattgcttacgtggagtttgagacc
cccgaggaggcccagaaagcccttaaatacatggatggaggtcagatcgacgggcaggaa
atcactgcagctgctgtgctgactcagatgatccgtggtccagcacgcagaatgtctcct
cctcgacgaatgccgccacctccaccgatgtggcgccgcagcccgccgcgcatgagacga
agatctcgctccccgagaaggcggtcgccaccacgccgccgttctcgttcccgatccccc
ggccgccggcgccatcgctcccgctcaagctcaaattcctccagatag
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